Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1504c

Experiment: 7H9 with Linezolid 0.44 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Linezolid 0.44 ug/mL
1,693,840	-				+1.8
1,693,992	-				-0.7
1,694,050	+				-0.8
1,694,051	-		Rv1503c	0.10	-1.0
1,694,194	-		Rv1503c	0.36	-0.0
1,694,245	+		Rv1503c	0.45	-0.0
1,694,246	-		Rv1503c	0.46	-1.1
1,694,246	-		Rv1503c	0.46	-0.2
1,694,248	+		Rv1503c	0.46	-1.6
1,694,248	+		Rv1503c	0.46	-0.2
1,694,255	+		Rv1503c	0.47	-0.0
1,694,258	+		Rv1503c	0.48	+0.5
1,694,259	-		Rv1503c	0.48	-0.2
1,694,259	-		Rv1503c	0.48	-0.5
1,694,259	-		Rv1503c	0.48	-0.3
1,694,259	-		Rv1503c	0.48	+0.4
1,694,259	-		Rv1503c	0.48	-0.0
1,694,546	+				-0.6
1,694,546	+				+1.8
1,694,651	+		Rv1504c	0.18	+1.2
1,694,751	-		Rv1504c	0.34	-2.0
1,694,751	-		Rv1504c	0.34	-0.1
1,694,795	-		Rv1504c	0.42	+0.1
1,694,897	+		Rv1504c	0.59	-0.2
1,694,897	+		Rv1504c	0.59	+0.0
1,694,898	-		Rv1504c	0.59	-0.2
1,694,908	+		Rv1504c	0.60	+0.8
1,694,909	-		Rv1504c	0.61	+1.5
1,694,930	-		Rv1504c	0.64	+0.5
1,694,930	-		Rv1504c	0.64	+1.0
1,694,983	+		Rv1504c	0.73	-0.5
1,694,983	+		Rv1504c	0.73	+0.0
1,694,983	+		Rv1504c	0.73	+0.2
1,694,983	+		Rv1504c	0.73	-0.4
1,694,983	+		Rv1504c	0.73	+0.1
1,694,984	-		Rv1504c	0.73	-0.2
1,694,984	-		Rv1504c	0.73	+0.2
1,695,087	-				-0.8
1,695,111	-				-0.0
1,695,275	-				+1.1
1,695,335	+				-0.3
1,695,336	-				-0.2
1,695,337	+				-0.8
1,695,340	-				-0.2