Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2739c

Experiment: 7H9 with Ethambutol 0.75 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethambutol 0.75 ug/mL
3,051,228	+				+0.1
3,051,228	+				-0.0
3,051,229	-				-0.4
3,051,230	+				-1.1
3,051,230	+				-0.1
3,051,230	+				+0.0
3,051,236	+				-1.0
3,051,282	-				-0.5
3,051,361	-				-1.5
3,051,483	+				-0.1
3,051,484	-				-0.1
3,051,749	-		Rv2737A	0.75	+0.2
3,052,013	-				+1.9
3,052,013	-				+0.0
3,052,828	+		Rv2739c	0.69	-0.8
3,052,828	+		Rv2739c	0.69	-1.1
3,052,829	-		Rv2739c	0.69	-0.9
3,052,829	-		Rv2739c	0.69	-1.0
3,052,866	+		Rv2739c	0.72	-0.5
3,053,220	+				+0.1
3,053,221	-				+0.8
3,053,369	-		Rv2740	0.30	-0.5
3,053,599	+		Rv2740	0.81	-0.5
3,053,599	+		Rv2740	0.81	-0.9
3,053,600	-		Rv2740	0.82	-0.1
3,053,611	+		Rv2740	0.84	-0.4
3,053,611	+		Rv2740	0.84	-0.8
3,053,611	+		Rv2740	0.84	-0.3
3,053,612	-		Rv2740	0.84	-0.5
3,053,612	-		Rv2740	0.84	-0.3
3,053,714	+				-0.7
3,053,715	-				+0.0
3,053,715	-				+0.1
3,053,757	-				-0.6
3,053,763	-				-0.5
3,053,831	-				-0.4
3,053,832	+				-0.6
3,053,833	-				-0.8
3,053,833	-				+0.2
3,054,097	+		Rv2741	0.12	-0.4
3,054,097	+		Rv2741	0.12	-0.7
3,054,097	+		Rv2741	0.12	-0.9
3,054,098	-		Rv2741	0.12	+1.8
3,054,166	+		Rv2741	0.16	-0.2
3,054,172	+		Rv2741	0.16	-0.2
3,054,172	+		Rv2741	0.16	-0.4
3,054,173	-		Rv2741	0.16	-0.8
3,054,173	-		Rv2741	0.16	-0.7