Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1427c

Experiment: 7H9 with Ethambutol 0.75 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethambutol 0.75 ug/mL
1,601,672	+		Rv1426c	0.49	-2.9
1,601,673	-		Rv1426c	0.49	-0.5
1,601,673	-		Rv1426c	0.49	-0.7
1,601,858	+		Rv1426c	0.63	+0.1
1,601,858	+		Rv1426c	0.63	-0.9
1,601,934	+		Rv1426c	0.69	-0.1
1,601,970	+		Rv1426c	0.72	-0.5
1,601,975	+		Rv1426c	0.73	-0.4
1,602,164	+		Rv1426c	0.87	-1.1
1,602,165	-		Rv1426c	0.88	+0.3
1,602,418	+				-1.1
1,602,418	+				+0.2
1,602,418	+				+1.5
1,602,514	+		Rv1427c	0.12	+0.1
1,602,595	+		Rv1427c	0.17	-1.4
1,602,595	+		Rv1427c	0.17	-0.9
1,602,728	+		Rv1427c	0.25	-0.7
1,602,729	-		Rv1427c	0.25	-0.1
1,602,729	-		Rv1427c	0.25	-1.3
1,602,731	-		Rv1427c	0.25	-1.0
1,602,760	+		Rv1427c	0.27	+0.6
1,603,392	+		Rv1427c	0.67	-1.0
1,603,392	+		Rv1427c	0.67	+0.5
1,603,505	-		Rv1427c	0.74	-0.2
1,603,922	+				-1.1
1,603,922	+				-0.2
1,603,998	+				+0.3
1,603,998	+				-0.3
1,603,999	-				+0.2
1,603,999	-				+2.0
1,604,064	+		Rv1428c	0.16	-1.1
1,604,064	+		Rv1428c	0.16	-1.3
1,604,218	+		Rv1428c	0.35	-1.8
1,604,218	+		Rv1428c	0.35	+0.1
1,604,218	+		Rv1428c	0.35	+0.1
1,604,219	-		Rv1428c	0.35	+0.3
1,604,219	-		Rv1428c	0.35	-0.5
1,604,293	+		Rv1428c	0.44	+0.8
1,604,525	-		Rv1428c	0.72	+0.4
1,604,641	+		Rv1428c	0.86	-0.5
1,604,642	-		Rv1428c	0.86	-0.4
1,604,642	-		Rv1428c	0.86	-0.1
1,604,642	-		Rv1428c	0.86	+1.9
1,604,670	+		Rv1428c	0.89	-1.0
1,604,671	-		Rv1428c	0.89	-3.0
1,604,808	-				-0.3
1,604,853	+				+0.5
1,604,923	-				-1.3
1,604,923	-				-0.4