Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1371

Experiment: 7H9 with Ethambutol 0.75 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethambutol 0.75 ug/mL
1,543,355	-				-0.5
1,543,355	-				-0.3
1,543,468	-				+0.4
1,543,468	-				+0.9
1,543,484	+				+0.2
1,543,561	-		Rv1371	0.14	-0.3
1,543,606	-		Rv1371	0.17	+0.4
1,543,631	+		Rv1371	0.19	-0.2
1,544,064	+		Rv1371	0.48	-1.9
1,544,147	+		Rv1371	0.54	-1.0
1,544,462	-		Rv1371	0.75	-0.7
1,544,698	-				-0.0
1,545,386	+		Rv1372	0.47	+1.5
1,545,387	-		Rv1372	0.48	-0.3
1,545,567	+		Rv1372	0.63	+0.6