Experiment: 7H9 with Ethambutol 0.75 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0265c and Rv0266c are separated by 21 nucleotides Rv0266c and Rv0267 are separated by 176 nucleotides
Rv0265c: Rv0265c - Probable periplasmic iron-transport lipoprotein, at 316,511 to 317,503
Rv0265c
Rv0266c: Rv0266c - Probable 5-oxoprolinase OplA (5-oxo-L-prolinase) (pyroglutamase) (5-OPASE), at 317,525 to 321,154
Rv0266c
Rv0267: Rv0267 - Probable integral membrane nitrite extrusion protein NarU (nitrite facilitator), at 321,331 to 322,722
Rv0267
Position (kb) 317
318
319
320
321
322 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 317.091 kb on + strand, within Rv0265c at 317.091 kb on + strand, within Rv0265c at 317.091 kb on + strand, within Rv0265c at 317.092 kb on - strand, within Rv0265c at 317.095 kb on + strand, within Rv0265c at 317.095 kb on + strand, within Rv0265c at 317.096 kb on - strand, within Rv0265c at 317.096 kb on - strand, within Rv0265c at 317.096 kb on - strand, within Rv0265c at 317.141 kb on + strand, within Rv0265c at 317.142 kb on - strand, within Rv0265c at 317.186 kb on + strand, within Rv0265c at 317.377 kb on + strand, within Rv0265c at 317.377 kb on + strand, within Rv0265c at 317.378 kb on - strand, within Rv0265c at 317.378 kb on - strand, within Rv0265c at 317.382 kb on - strand, within Rv0265c at 317.709 kb on + strand at 317.828 kb on + strand at 317.932 kb on - strand, within Rv0266c at 317.970 kb on + strand, within Rv0266c at 317.973 kb on + strand, within Rv0266c at 317.974 kb on - strand, within Rv0266c at 317.974 kb on - strand, within Rv0266c at 317.974 kb on - strand, within Rv0266c at 317.974 kb on - strand, within Rv0266c at 318.146 kb on - strand, within Rv0266c at 318.210 kb on + strand, within Rv0266c at 318.210 kb on + strand, within Rv0266c at 318.210 kb on + strand, within Rv0266c at 318.210 kb on + strand, within Rv0266c at 318.734 kb on + strand, within Rv0266c at 318.734 kb on + strand, within Rv0266c at 318.735 kb on - strand, within Rv0266c at 318.808 kb on - strand, within Rv0266c at 318.825 kb on + strand, within Rv0266c at 318.825 kb on + strand, within Rv0266c at 318.826 kb on - strand, within Rv0266c at 318.826 kb on - strand, within Rv0266c at 318.827 kb on + strand, within Rv0266c at 318.827 kb on + strand, within Rv0266c at 318.827 kb on + strand, within Rv0266c at 318.828 kb on - strand, within Rv0266c at 318.828 kb on - strand, within Rv0266c at 318.828 kb on - strand, within Rv0266c at 318.828 kb on - strand, within Rv0266c at 319.305 kb on + strand, within Rv0266c at 319.305 kb on + strand, within Rv0266c at 319.443 kb on + strand, within Rv0266c at 319.530 kb on + strand, within Rv0266c at 319.530 kb on + strand, within Rv0266c at 319.531 kb on - strand, within Rv0266c at 319.905 kb on + strand, within Rv0266c at 319.905 kb on + strand, within Rv0266c at 320.030 kb on + strand, within Rv0266c at 320.110 kb on - strand, within Rv0266c at 320.271 kb on + strand, within Rv0266c at 320.272 kb on - strand, within Rv0266c at 320.283 kb on + strand, within Rv0266c at 320.327 kb on - strand, within Rv0266c at 320.523 kb on + strand, within Rv0266c at 320.524 kb on - strand, within Rv0266c at 320.542 kb on + strand, within Rv0266c at 320.658 kb on + strand, within Rv0266c at 320.658 kb on + strand, within Rv0266c at 320.658 kb on + strand, within Rv0266c at 320.659 kb on - strand, within Rv0266c at 320.659 kb on - strand, within Rv0266c at 320.659 kb on - strand, within Rv0266c at 320.802 kb on + strand at 320.802 kb on + strand at 320.803 kb on - strand at 320.803 kb on - strand at 320.803 kb on - strand at 320.803 kb on - strand at 320.996 kb on + strand at 321.220 kb on + strand at 321.220 kb on + strand at 321.221 kb on - strand at 321.221 kb on - strand at 321.221 kb on - strand at 321.221 kb on - strand at 321.226 kb on + strand at 321.226 kb on + strand at 321.227 kb on - strand at 321.227 kb on - strand at 321.227 kb on - strand at 321.237 kb on + strand at 321.238 kb on - strand at 321.260 kb on - strand at 321.325 kb on + strand at 321.326 kb on - strand at 321.361 kb on + strand at 321.605 kb on + strand, within Rv0267 at 321.606 kb on - strand, within Rv0267 at 321.606 kb on - strand, within Rv0267 at 321.655 kb on + strand, within Rv0267 at 321.656 kb on - strand, within Rv0267 at 322.035 kb on + strand, within Rv0267 at 322.035 kb on + strand, within Rv0267 at 322.035 kb on + strand, within Rv0267 at 322.124 kb on - strand, within Rv0267
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Ethambutol 0.75 ug/mL remove 317,091 + Rv0265c 0.58 -0.3 317,091 + Rv0265c 0.58 -0.7 317,091 + Rv0265c 0.58 -1.6 317,092 - Rv0265c 0.59 -1.7 317,095 + Rv0265c 0.59 -0.3 317,095 + Rv0265c 0.59 -1.7 317,096 - Rv0265c 0.59 -0.8 317,096 - Rv0265c 0.59 -0.7 317,096 - Rv0265c 0.59 -0.2 317,141 + Rv0265c 0.63 +0.1 317,142 - Rv0265c 0.64 -0.2 317,186 + Rv0265c 0.68 -0.0 317,377 + Rv0265c 0.87 +0.2 317,377 + Rv0265c 0.87 -0.3 317,378 - Rv0265c 0.87 +0.9 317,378 - Rv0265c 0.87 -0.9 317,382 - Rv0265c 0.88 -1.0 317,709 + -1.3 317,828 + +0.5 317,932 - Rv0266c 0.11 -0.7 317,970 + Rv0266c 0.12 -0.5 317,973 + Rv0266c 0.12 +0.1 317,974 - Rv0266c 0.12 -0.1 317,974 - Rv0266c 0.12 +0.7 317,974 - Rv0266c 0.12 -0.5 317,974 - Rv0266c 0.12 -0.3 318,146 - Rv0266c 0.17 -0.2 318,210 + Rv0266c 0.19 -0.8 318,210 + Rv0266c 0.19 -0.4 318,210 + Rv0266c 0.19 +0.0 318,210 + Rv0266c 0.19 -0.4 318,734 + Rv0266c 0.33 -0.1 318,734 + Rv0266c 0.33 +0.3 318,735 - Rv0266c 0.33 -0.4 318,808 - Rv0266c 0.35 -0.9 318,825 + Rv0266c 0.36 -0.8 318,825 + Rv0266c 0.36 -0.1 318,826 - Rv0266c 0.36 -0.3 318,826 - Rv0266c 0.36 -0.0 318,827 + Rv0266c 0.36 -2.1 318,827 + Rv0266c 0.36 -0.0 318,827 + Rv0266c 0.36 -0.8 318,828 - Rv0266c 0.36 -0.1 318,828 - Rv0266c 0.36 -0.3 318,828 - Rv0266c 0.36 +0.2 318,828 - Rv0266c 0.36 -0.1 319,305 + Rv0266c 0.49 -0.1 319,305 + Rv0266c 0.49 -0.9 319,443 + Rv0266c 0.53 -0.3 319,530 + Rv0266c 0.55 +0.3 319,530 + Rv0266c 0.55 +0.4 319,531 - Rv0266c 0.55 -0.1 319,905 + Rv0266c 0.66 +0.2 319,905 + Rv0266c 0.66 +0.5 320,030 + Rv0266c 0.69 -1.9 320,110 - Rv0266c 0.71 +0.6 320,271 + Rv0266c 0.76 -0.3 320,272 - Rv0266c 0.76 -0.2 320,283 + Rv0266c 0.76 -0.5 320,327 - Rv0266c 0.77 -0.1 320,523 + Rv0266c 0.83 +0.2 320,524 - Rv0266c 0.83 +0.3 320,542 + Rv0266c 0.83 -0.8 320,658 + Rv0266c 0.86 -0.5 320,658 + Rv0266c 0.86 -0.5 320,658 + Rv0266c 0.86 -1.9 320,659 - Rv0266c 0.86 -1.4 320,659 - Rv0266c 0.86 -0.5 320,659 - Rv0266c 0.86 -0.5 320,802 + -0.5 320,802 + -0.1 320,803 - +0.1 320,803 - -0.1 320,803 - +0.0 320,803 - -0.0 320,996 + -0.5 321,220 + -0.6 321,220 + -0.0 321,221 - -1.0 321,221 - -0.1 321,221 - +0.1 321,221 - -0.4 321,226 + +0.3 321,226 + -0.6 321,227 - -1.9 321,227 - +0.1 321,227 - +2.9 321,237 + -1.7 321,238 - -0.1 321,260 - -0.1 321,325 + -0.3 321,326 - -0.4 321,361 + +0.4 321,605 + Rv0267 0.20 -0.6 321,606 - Rv0267 0.20 -0.4 321,606 - Rv0267 0.20 +0.1 321,655 + Rv0267 0.23 +0.1 321,656 - Rv0267 0.23 +0.4 322,035 + Rv0267 0.51 -0.2 322,035 + Rv0267 0.51 -0.4 322,035 + Rv0267 0.51 +0.2 322,124 - Rv0267 0.57 -0.3
Or see this region's nucleotide sequence