Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3386

Experiment: 7H9 with Ethambutol 0.75 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethambutol 0.75 ug/mL
3,799,121	+				-0.5
3,799,152	-				-0.6
3,799,155	+				-0.2
3,799,156	-				-0.6
3,799,156	-				+0.1
3,799,304	+		Rv3384c	0.16	+1.4
3,799,622	+				-1.5
3,799,622	+				+0.0
3,799,623	-				-0.6
3,799,988	-				+0.3
3,800,105	+				+0.9
3,800,314	+		Rv3386	0.31	-1.0
3,800,794	+				-0.2
3,801,356	+		Rv3387	0.84	-0.7
3,801,356	+		Rv3387	0.84	-1.2
3,801,546	+				-0.9
3,801,546	+				-1.1
3,801,546	+				-0.5
3,801,547	-				-0.1
3,801,547	-				-1.1
3,801,547	-				+0.1
3,801,549	+				+0.4
3,801,550	+				-0.4
3,801,550	-				-0.4
3,801,550	-				-0.2
3,801,550	-				-0.7
3,801,553	+				-0.1