Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3341

Experiment: 7H9 with Ethambutol 0.75 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethambutol 0.75 ug/mL
3,726,502	+		Rv3340	0.28	+0.0
3,727,111	+		Rv3340	0.73	+0.2
3,727,111	+		Rv3340	0.73	-0.1
3,727,111	+		Rv3340	0.73	-0.3
3,727,389	+				-0.7
3,727,504	+				+0.1
3,727,504	+				-0.2
3,728,699	+		Rv3342	0.10	-0.5
3,729,134	-		Rv3342	0.70	+0.9
3,729,212	+		Rv3342	0.80	-0.5
3,729,468	-				+0.7