Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3257c
Experiment: 7H9 with Bedaquiline 0.15 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Bedaquiline 0.15 ug/mL |
---|---|---|---|---|---|
remove | |||||
3,636,826 | - | Rv3256c | 0.53 | +1.9 | |
3,637,083 | - | Rv3256c | 0.78 | +1.5 | |
3,638,759 | + | +1.9 | |||
3,638,813 | - | +0.8 | |||
3,639,506 | + | Rv3259 | 0.19 | +1.3 | |
3,639,506 | + | Rv3259 | 0.19 | -0.4 | |
3,639,506 | + | Rv3259 | 0.19 | +0.2 | |
3,639,507 | - | Rv3259 | 0.20 | -0.5 |
Or see this region's nucleotide sequence