Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3102c

Experiment: 7H9 with Bedaquiline 0.15 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Bedaquiline 0.15 ug/mL
3,469,788	-				+1.1
3,469,814	-				-4.8
3,470,373	-		Rv3101c	0.66	-1.3
3,470,566	-		Rv3101c	0.87	-4.0
3,470,660	-				-3.5
3,470,831	-		Rv3102c	0.22	-2.7
3,470,848	-		Rv3102c	0.24	-4.4
3,471,078	-		Rv3102c	0.58	-3.4
3,471,385	+				-0.1
3,471,441	+				-0.7
3,471,442	-				+0.9
3,471,657	+		Rv3103c	0.56	+0.4
3,471,657	+		Rv3103c	0.56	-0.2
3,471,658	-		Rv3103c	0.56	+0.4
3,471,733	+		Rv3103c	0.73	-1.8
3,471,735	+		Rv3103c	0.74	-0.3
3,471,735	+		Rv3103c	0.74	-0.6
3,471,735	+		Rv3103c	0.74	-0.4
3,471,736	-		Rv3103c	0.74	-0.4
3,471,736	-		Rv3103c	0.74	+0.1
3,471,736	-		Rv3103c	0.74	-0.1
3,471,745	-		Rv3103c	0.76	-1.3
3,471,745	-		Rv3103c	0.76	-0.1