Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1946c

Experiment: 7H9 with Bedaquiline 0.15 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Bedaquiline 0.15 ug/mL
2,197,300	+				-0.0
2,197,601	+		Rv1946c	0.21	-0.9
2,197,602	-		Rv1946c	0.21	-0.7
2,197,847	+		Rv1946c	0.75	-1.4
2,197,847	+		Rv1946c	0.75	-1.1
2,198,243	+		Rv1947	0.54	-0.9
2,198,420	-				-0.3
2,198,451	+				+0.2
2,198,604	-				-0.9
2,198,922	-		Rv1948c	0.59	-0.3
2,198,930	+		Rv1948c	0.62	+0.1
2,198,930	+		Rv1948c	0.62	+0.0
2,198,931	-		Rv1948c	0.62	-0.3