Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1679

Experiment: 7H9 with Bedaquiline 0.15 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Bedaquiline 0.15 ug/mL
1,902,512	-		Rv1678	0.13	+0.3
1,902,568	+		Rv1678	0.19	-0.7
1,902,569	-		Rv1678	0.19	-0.7
1,902,569	-		Rv1678	0.19	-0.6
1,903,020	-		Rv1678	0.69	+0.7
1,903,759	-		Rv1679	0.41	-0.4
1,903,923	+		Rv1679	0.56	-0.3
1,904,385	+				-0.2
1,904,565	-		Rv1680	0.16	-0.1
1,904,817	-		Rv1680	0.47	-0.6
1,905,070	+		Rv1680	0.78	-1.4
1,905,089	+		Rv1680	0.80	-0.2
1,905,258	-				-0.1