Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0100

Experiment: 7H9 with Bedaquiline 0.15 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Bedaquiline 0.15 ug/mL
108,807	+		Rv0099	0.40	+1.6
108,854	+		Rv0099	0.43	+0.6
108,854	+		Rv0099	0.43	-0.9
108,855	-		Rv0099	0.43	+0.3
109,286	-		Rv0099	0.70	+0.4
109,286	-		Rv0099	0.70	-0.7
109,822	+		Rv0100	0.16	-0.2
109,916	+		Rv0100	0.56	-2.2
109,917	-		Rv0100	0.57	-1.5
110,041	-				+0.3
110,075	-				-0.5
110,075	-				+0.1
110,149	+				-0.8