Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3700c

Experiment: 7H9 with Rifampicin 0.014 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.014 ug/mL
4,141,832	+		Rv3698	0.88	-0.5
4,142,008	-				-2.0
4,142,057	+				-0.2
4,142,057	+				+0.5
4,142,184	-		Rv3699	0.20	-0.6
4,142,236	+		Rv3699	0.27	-0.3
4,142,237	-		Rv3699	0.27	-0.3
4,142,441	-		Rv3699	0.57	-0.1
4,142,482	+		Rv3699	0.62	-1.2
4,142,485	+		Rv3699	0.63	+0.2
4,142,720	+				-0.6
4,142,720	+				-3.5
4,142,720	+				+1.2
4,142,891	-		Rv3700c	0.12	-1.4
4,143,075	-		Rv3700c	0.28	-1.8
4,143,492	+		Rv3700c	0.63	+0.8
4,143,745	+		Rv3700c	0.85	-0.3
4,143,745	+		Rv3700c	0.85	+1.8
4,143,746	-		Rv3700c	0.85	+0.6
4,143,837	+				-1.7