Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3253c

Experiment: 7H9 with Rifampicin 0.014 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.014 ug/mL
3,631,099	+		Rv3252c	0.29	-1.4
3,631,099	+		Rv3252c	0.29	-0.2
3,631,099	+		Rv3252c	0.29	+0.3
3,631,100	-		Rv3252c	0.29	+0.7
3,631,113	+		Rv3252c	0.30	+0.2
3,631,241	-		Rv3252c	0.40	-1.2
3,631,426	+		Rv3252c	0.55	-0.0
3,631,426	+		Rv3252c	0.55	-0.1
3,631,426	+		Rv3252c	0.55	-0.3
3,631,426	+		Rv3252c	0.55	-0.7
3,631,427	-		Rv3252c	0.55	+0.2
3,631,427	-		Rv3252c	0.55	+0.1
3,631,427	-		Rv3252c	0.55	+0.7
3,631,427	-		Rv3252c	0.55	-0.0
3,631,438	+		Rv3252c	0.56	-0.6
3,631,627	+		Rv3252c	0.71	-0.6
3,631,628	-		Rv3252c	0.71	-0.2
3,631,666	+		Rv3252c	0.74	-1.7
3,631,666	+		Rv3252c	0.74	-1.7
3,631,666	+		Rv3252c	0.74	-0.3
3,631,667	-		Rv3252c	0.74	-0.3
3,631,667	-		Rv3252c	0.74	-0.3
3,631,667	-		Rv3252c	0.74	+0.2
3,631,667	-		Rv3252c	0.74	-0.0
3,631,667	-		Rv3252c	0.74	+0.5
3,631,667	-		Rv3252c	0.74	+0.4
3,631,667	-		Rv3252c	0.74	+0.8
3,631,667	-		Rv3252c	0.74	-0.8
3,631,672	+		Rv3252c	0.75	+0.2
3,631,672	+		Rv3252c	0.75	-0.2
3,631,672	+		Rv3252c	0.75	+3.0
3,631,673	-		Rv3252c	0.75	-2.4
3,631,687	+		Rv3252c	0.76	-0.0
3,631,690	+		Rv3252c	0.76	+0.6
3,631,690	+		Rv3252c	0.76	+0.7
3,631,690	+		Rv3252c	0.76	+0.3
3,631,690	+		Rv3252c	0.76	-0.3
3,631,690	+		Rv3252c	0.76	-0.7
3,631,755	+		Rv3252c	0.81	-0.3
3,631,756	-		Rv3252c	0.81	-0.1
3,631,756	-		Rv3252c	0.81	+0.0
3,631,756	-		Rv3252c	0.81	-0.3
3,631,780	+		Rv3252c	0.83	-0.3
3,631,780	+		Rv3252c	0.83	+1.7
3,631,909	+				+0.0
3,631,909	+				-1.2
3,631,988	+				-0.1
3,631,988	+				-0.2
3,631,988	+				-0.3
3,631,988	+				+0.1
3,631,989	-				+0.3
3,632,051	-				+0.2
3,632,062	+				-0.2
3,632,093	+				+0.1
3,632,093	+				+0.2
3,632,094	-				-0.4
3,632,161	+				+0.7
3,632,171	-				-1.4
3,632,274	+		Rv3253c	0.12	+0.4
3,632,617	+		Rv3253c	0.35	+0.0
3,632,617	+		Rv3253c	0.35	+1.3
3,632,689	+		Rv3253c	0.40	+0.0
3,632,689	+		Rv3253c	0.40	+0.2
3,632,689	+		Rv3253c	0.40	-0.2
3,632,689	+		Rv3253c	0.40	-1.0
3,632,689	+		Rv3253c	0.40	+0.6
3,632,690	-		Rv3253c	0.40	-0.1
3,632,690	-		Rv3253c	0.40	-0.4
3,632,729	-		Rv3253c	0.42	-0.1
3,632,873	-		Rv3253c	0.52	-0.7
3,632,881	+		Rv3253c	0.53	+0.2
3,632,882	-		Rv3253c	0.53	-0.0
3,632,882	-		Rv3253c	0.53	-0.0
3,632,977	+		Rv3253c	0.59	+1.1
3,632,995	+		Rv3253c	0.60	-0.2
3,632,995	+		Rv3253c	0.60	+1.7
3,632,996	-		Rv3253c	0.60	-0.0
3,632,996	-		Rv3253c	0.60	-0.3
3,633,293	-		Rv3253c	0.80	+0.8
3,633,302	+		Rv3253c	0.81	-0.0
3,633,302	+		Rv3253c	0.81	-0.0
3,633,302	+		Rv3253c	0.81	-0.6
3,633,302	+		Rv3253c	0.81	+0.1
3,633,302	+		Rv3253c	0.81	+3.7
3,633,304	+		Rv3253c	0.81	-0.1
3,633,304	+		Rv3253c	0.81	+0.6
3,633,305	-		Rv3253c	0.81	-0.2
3,633,447	+				-0.2
3,633,620	+				-0.6
3,633,620	+				-1.6
3,633,620	+				-1.8
3,633,628	-				-0.3
3,633,924	-		Rv3254	0.18	+1.2
3,633,928	-		Rv3254	0.18	-0.4
3,633,965	+		Rv3254	0.21	+0.0
3,633,991	-		Rv3254	0.23	+0.5
3,633,991	-		Rv3254	0.23	-0.4
3,634,172	-		Rv3254	0.36	-0.2
3,634,284	+		Rv3254	0.44	-0.1
3,634,386	+		Rv3254	0.51	-0.1
3,634,387	-		Rv3254	0.51	+0.2