Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2224c

Experiment: 7H9 with Rifampicin 0.014 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.014 ug/mL
2,494,487	-		Rv2223c	0.42	+0.3
2,494,555	+		Rv2223c	0.46	-0.6
2,494,555	+		Rv2223c	0.46	+2.7
2,494,556	-		Rv2223c	0.46	+0.2
2,494,629	-		Rv2223c	0.51	+1.6
2,494,662	-		Rv2223c	0.53	+0.1
2,494,703	-		Rv2223c	0.55	+0.9
2,494,703	-		Rv2223c	0.55	-0.4
2,494,703	-		Rv2223c	0.55	+0.3
2,494,717	+		Rv2223c	0.56	-0.5
2,494,717	+		Rv2223c	0.56	-0.2
2,494,717	+		Rv2223c	0.56	+0.7
2,495,028	-		Rv2223c	0.76	+1.7
2,495,155	+		Rv2223c	0.84	-1.3
2,495,156	-		Rv2223c	0.84	-0.5
2,495,322	+				-0.2
2,495,415	+				+0.2
2,495,415	+				+0.3
2,495,416	-				-1.9
2,495,504	+				-2.0
2,495,545	+				-1.8
2,495,545	+				-0.9
2,495,546	-				-3.4
2,495,546	-				-2.9
2,495,621	+		Rv2224c	0.10	-2.5
2,495,622	-		Rv2224c	0.10	+0.1
2,495,622	-		Rv2224c	0.10	-3.9
2,495,622	-		Rv2224c	0.10	-2.0
2,495,762	+		Rv2224c	0.19	-1.8
2,495,763	-		Rv2224c	0.19	-3.3
2,495,909	+		Rv2224c	0.29	-1.8
2,495,909	+		Rv2224c	0.29	-2.5
2,495,909	+		Rv2224c	0.29	-3.4
2,495,909	+		Rv2224c	0.29	+0.7
2,495,909	+		Rv2224c	0.29	-4.2
2,495,909	+		Rv2224c	0.29	-3.6
2,495,910	-		Rv2224c	0.29	-2.8
2,495,910	-		Rv2224c	0.29	-3.1
2,495,910	-		Rv2224c	0.29	-2.5
2,495,910	-		Rv2224c	0.29	-2.8
2,495,999	+		Rv2224c	0.34	-1.4
2,496,000	-		Rv2224c	0.34	+1.1
2,496,010	-		Rv2224c	0.35	-3.1
2,496,033	+		Rv2224c	0.37	-3.1
2,496,033	+		Rv2224c	0.37	-1.7
2,496,034	-		Rv2224c	0.37	-0.6
2,496,035	+		Rv2224c	0.37	-1.7
2,496,036	-		Rv2224c	0.37	-1.9
2,496,123	-		Rv2224c	0.42	-2.4
2,496,191	+		Rv2224c	0.47	-2.4
2,496,192	-		Rv2224c	0.47	-2.4
2,496,192	-		Rv2224c	0.47	-1.8
2,496,192	-		Rv2224c	0.47	+0.2
2,496,192	-		Rv2224c	0.47	-3.3
2,496,315	-		Rv2224c	0.55	-2.3
2,496,315	-		Rv2224c	0.55	+1.7
2,496,339	-		Rv2224c	0.56	-3.0
2,496,345	-		Rv2224c	0.57	-2.0
2,496,345	-		Rv2224c	0.57	-2.7
2,496,353	+		Rv2224c	0.57	-1.4
2,496,516	-		Rv2224c	0.67	-1.5
2,496,706	+		Rv2224c	0.80	-1.1
2,496,818	-		Rv2224c	0.87	-3.3
2,496,838	+		Rv2224c	0.88	-2.9
2,496,838	+		Rv2224c	0.88	-3.1
2,496,838	+		Rv2224c	0.88	-2.2
2,496,839	-		Rv2224c	0.88	-0.9
2,496,839	-		Rv2224c	0.88	-3.5
2,496,903	+				-2.2
2,497,136	+				+0.0
2,497,136	+				+1.1
2,497,137	-				-0.6
2,497,137	-				+0.4
2,497,137	-				-0.2
2,497,623	+				-0.7
2,497,624	-				+1.7
2,497,624	-				-0.1