Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2132

Experiment: 7H9 with Rifampicin 0.014 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.014 ug/mL
2,393,564	+		Rv2132	0.66	-1.2
2,393,565	-		Rv2132	0.67	-0.2
2,393,565	-		Rv2132	0.67	-1.4
2,393,588	+		Rv2132	0.77	-1.2
2,393,639	+				+0.7
2,393,852	+				+1.5
2,393,852	+				-1.1
2,394,120	-		Rv2133c	0.34	+0.1
2,394,120	-		Rv2133c	0.34	-0.6
2,394,177	+		Rv2133c	0.41	-0.3
2,394,178	-		Rv2133c	0.41	-0.3
2,394,178	-		Rv2133c	0.41	-0.3
2,394,178	-		Rv2133c	0.41	+1.7
2,394,178	-		Rv2133c	0.41	-0.4
2,394,178	-		Rv2133c	0.41	-0.3
2,394,258	-		Rv2133c	0.52	-1.1
2,394,379	+		Rv2133c	0.67	-0.4
2,394,379	+		Rv2133c	0.67	-0.1
2,394,379	+		Rv2133c	0.67	+0.2
2,394,380	-		Rv2133c	0.67	-0.1
2,394,380	-		Rv2133c	0.67	-1.0
2,394,388	+		Rv2133c	0.68	-0.6
2,394,389	-		Rv2133c	0.68	+0.1
2,394,533	+		Rv2133c	0.86	+1.7