Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1486c

Experiment: 7H9 with Rifampicin 0.014 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.014 ug/mL
1,676,304	+		Rv1486c	0.33	-0.4
1,676,304	+		Rv1486c	0.33	+1.0
1,676,305	-		Rv1486c	0.33	-0.4
1,676,305	-		Rv1486c	0.33	+0.2
1,676,387	+		Rv1486c	0.43	+0.8
1,676,387	+		Rv1486c	0.43	+1.0
1,676,388	-		Rv1486c	0.43	+1.1
1,676,420	+		Rv1486c	0.46	-0.5
1,676,421	-		Rv1486c	0.47	+0.2
1,676,421	-		Rv1486c	0.47	+4.7
1,676,762	+		Rv1486c	0.86	+0.3
1,676,896	+				+0.1
1,676,896	+				-0.9
1,676,930	-				-0.0
1,676,935	-				-0.0
1,677,053	+		Rv1487	0.26	+0.1
1,677,204	+		Rv1487	0.60	+0.4
1,677,204	+		Rv1487	0.60	-0.3
1,677,204	+		Rv1487	0.60	-1.0
1,677,205	-		Rv1487	0.61	-0.1
1,677,373	+				+0.2
1,677,374	-				+2.7
1,677,525	+		Rv1488	0.11	-1.0
1,677,525	+		Rv1488	0.11	-0.1
1,677,526	-		Rv1488	0.11	-0.8
1,677,526	-		Rv1488	0.11	+0.1
1,677,676	+		Rv1488	0.24	+1.2
1,677,677	-		Rv1488	0.24	+0.2
1,677,710	-		Rv1488	0.27	+1.7
1,677,724	+		Rv1488	0.29	+0.1
1,677,724	+		Rv1488	0.29	-0.1
1,677,725	-		Rv1488	0.29	-0.2
1,677,725	-		Rv1488	0.29	+0.3
1,677,725	-		Rv1488	0.29	-0.6
1,677,725	-		Rv1488	0.29	-0.9