Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1369c

Experiment: 7H9 with Rifampicin 0.014 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.014 ug/mL
1,541,262	-		Rv1368	0.31	-0.4
1,541,438	-		Rv1368	0.53	+1.3
1,541,438	-		Rv1368	0.53	+0.7
1,541,467	+		Rv1368	0.57	-1.1
1,541,467	+		Rv1368	0.57	-1.0
1,541,467	+		Rv1368	0.57	+2.7
1,541,468	-		Rv1368	0.57	-0.2
1,541,468	-		Rv1368	0.57	+0.1
1,541,468	-		Rv1368	0.57	-0.8
1,541,630	+		Rv1368	0.78	+0.6
1,541,630	+		Rv1368	0.78	-0.3
1,541,631	-		Rv1368	0.78	-1.1
1,541,631	-		Rv1368	0.78	+0.3
1,541,635	-		Rv1368	0.78	-0.2
1,541,635	-		Rv1368	0.78	-0.0
1,541,635	-		Rv1368	0.78	-0.5
1,543,355	-				-0.4
1,543,355	-				-0.2
1,543,468	-				+0.6
1,543,484	+				+0.1
1,543,561	-		Rv1371	0.14	-0.7
1,543,606	-		Rv1371	0.17	-0.2
1,543,631	+		Rv1371	0.19	-0.4