Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0983

Experiment: 7H9 with Rifampicin 0.014 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.014 ug/mL
1,098,987	-				-0.9
1,099,020	+				-0.5
1,099,020	+				-0.6
1,099,021	-				+2.5
1,099,032	+				-1.1
1,099,032	+				+0.1
1,099,033	-				-0.3
1,099,033	-				+1.7
1,099,094	+				-1.1
1,099,097	+				+0.2
1,099,098	-				-2.4
1,099,098	-				+0.7
1,099,302	-		Rv0983	0.17	-0.4
1,100,010	+		Rv0983	0.68	-1.6
1,100,010	+		Rv0983	0.68	-1.2
1,100,200	+		Rv0983	0.81	-0.6
1,100,255	+		Rv0983	0.85	-2.1
1,100,255	+		Rv0983	0.85	-0.7
1,100,255	+		Rv0983	0.85	+0.3
1,100,256	-		Rv0983	0.85	-1.3
1,100,495	+				+1.2
1,100,495	+				-0.9
1,100,495	+				-0.9
1,100,495	+				-1.2
1,100,925	+		Rv0984	0.85	-0.5
1,101,190	+		Rv0985c	0.36	-0.8
1,101,190	+		Rv0985c	0.36	-0.1
1,101,191	-		Rv0985c	0.36	+0.3
1,101,200	+		Rv0985c	0.38	+0.1
1,101,214	+		Rv0985c	0.41	-0.6
1,101,215	-		Rv0985c	0.42	+0.7
1,101,215	-		Rv0985c	0.42	+0.1
1,101,221	+		Rv0985c	0.43	+1.5
1,101,363	+		Rv0985c	0.74	+1.6
1,101,363	+		Rv0985c	0.74	+0.4
1,101,364	-		Rv0985c	0.74	+0.6
1,101,444	+				-0.6
1,101,445	-				-0.3