Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3420c

Experiment: 7H9 with Rifampicin 0.014 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.014 ug/mL
3,837,955	+		Rv3419c	0.39	+3.1
3,838,167	-		Rv3419c	0.59	+0.5
3,838,167	-		Rv3419c	0.59	+1.3
3,838,220	-		Rv3419c	0.64	+1.6
3,838,621	-				-0.2
3,838,800	+		Rv3420c	0.45	+0.2
3,838,911	+		Rv3420c	0.68	-0.3
3,838,912	-		Rv3420c	0.68	+0.1
3,838,912	-		Rv3420c	0.68	+0.6
3,839,102	+				+0.8
3,839,103	-				+0.8
3,839,103	-				+0.4
3,839,400	-		Rv3421c	0.54	-0.5
3,839,678	-				-0.3