Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3414c

Experiment: 7H9 with Rifampicin 0.014 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.014 ug/mL
3,832,484	+		Rv3413c	0.38	+0.2
3,832,485	-		Rv3413c	0.38	-0.7
3,833,045	+				-1.7
3,833,046	-				-1.5
3,833,310	-		Rv3414c	0.43	-1.5
3,833,369	+		Rv3414c	0.52	-2.9
3,833,422	+		Rv3414c	0.60	-2.8
3,833,623	+				-1.7
3,833,658	+				-1.5
3,834,126	+		Rv3415c	0.52	-0.2
3,834,126	+		Rv3415c	0.52	-1.0
3,834,126	+		Rv3415c	0.52	-0.9
3,834,126	+		Rv3415c	0.52	-0.2
3,834,127	-		Rv3415c	0.52	-0.8
3,834,296	+		Rv3415c	0.73	-0.2
3,834,296	+		Rv3415c	0.73	-0.3
3,834,296	+		Rv3415c	0.73	-0.5
3,834,296	+		Rv3415c	0.73	+1.2
3,834,296	+		Rv3415c	0.73	-0.4
3,834,296	+		Rv3415c	0.73	-0.1
3,834,296	+		Rv3415c	0.73	+0.4
3,834,296	+		Rv3415c	0.73	+1.4
3,834,361	+		Rv3415c	0.81	+0.7
3,834,438	+		Rv3415c	0.90	+0.3
3,834,649	+				+0.4