Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3255c
Experiment: 7H9 with Rifampicin 0.014 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Rifampicin 0.014 ug/mL |
---|---|---|---|---|---|
remove | |||||
3,634,172 | - | Rv3254 | 0.36 | -0.3 | |
3,634,284 | + | Rv3254 | 0.44 | +0.2 | |
3,634,386 | + | Rv3254 | 0.51 | +0.2 | |
3,634,387 | - | Rv3254 | 0.51 | -0.1 | |
3,634,688 | - | Rv3254 | 0.73 | -0.3 | |
3,634,718 | + | Rv3254 | 0.75 | -1.7 | |
3,634,718 | + | Rv3254 | 0.75 | +0.2 | |
3,634,770 | + | Rv3254 | 0.79 | +0.0 | |
3,634,771 | - | Rv3254 | 0.79 | +0.7 | |
3,634,950 | + | +0.2 | |||
3,634,951 | - | -0.3 | |||
3,636,826 | - | Rv3256c | 0.53 | +2.3 | |
3,637,083 | - | Rv3256c | 0.78 | +0.3 |
Or see this region's nucleotide sequence