Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2433c

Experiment: 7H9 with Rifampicin 0.014 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.014 ug/mL
2,727,874	+				+1.2
2,727,875	-				-0.3
2,727,876	+				-0.2
2,727,877	-				-0.5
2,727,877	-				-0.4
2,727,877	-				-0.2
2,727,969	-				+0.6
2,728,007	+		Rv2431c	0.13	+0.3
2,728,007	+		Rv2431c	0.13	+0.1
2,728,008	-		Rv2431c	0.14	-1.2
2,728,008	-		Rv2431c	0.14	-1.7
2,728,008	-		Rv2431c	0.14	+0.1
2,728,008	-		Rv2431c	0.14	-0.1
2,728,008	-		Rv2431c	0.14	+0.3
2,728,083	-		Rv2431c	0.39	-0.2
2,728,094	+		Rv2431c	0.42	-0.4
2,728,379	+				+1.7
2,728,379	+				-0.6
2,728,383	+				-0.4
2,728,384	-				+0.1
2,728,498	+		Rv2432c	0.15	-0.1
2,728,504	-		Rv2432c	0.16	+1.7
2,728,681	-		Rv2432c	0.59	+0.7
2,728,938	+		Rv2433c	0.32	+0.7
2,729,015	+		Rv2433c	0.59	+0.0
2,729,015	+		Rv2433c	0.59	+0.9
2,729,015	+		Rv2433c	0.59	-0.5
2,729,657	-		Rv2434c	0.37	-0.8
2,729,821	-		Rv2434c	0.49	-0.1