Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2427c

Experiment: 7H9 with Rifampicin 0.014 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.014 ug/mL
2,723,294	-				-0.1
2,723,309	+				+1.7
2,723,309	+				+1.0
2,723,309	+				-0.9
2,723,469	+		Rv2426c	0.18	+0.7
2,723,469	+		Rv2426c	0.18	+0.5
2,723,506	+		Rv2426c	0.23	-0.6
2,723,507	-		Rv2426c	0.23	-1.0
2,723,507	-		Rv2426c	0.23	-1.2
2,723,597	+		Rv2426c	0.33	-0.2
2,723,907	+		Rv2426c	0.68	-0.5
2,723,925	-		Rv2426c	0.70	+0.0
2,723,925	-		Rv2426c	0.70	+2.1
2,723,925	-		Rv2426c	0.70	+1.3
2,723,954	+		Rv2426c	0.74	-0.5
2,724,218	+				-1.5
2,724,218	+				-0.4
2,724,587	+		Rv2427c	0.29	-0.9
2,724,756	+		Rv2427c	0.42	+0.2
2,724,756	+		Rv2427c	0.42	+0.8
2,724,757	-		Rv2427c	0.42	+1.1
2,724,963	-		Rv2427c	0.59	+1.2
2,725,147	+		Rv2427c	0.73	-0.9
2,725,147	+		Rv2427c	0.73	+1.1
2,725,148	-		Rv2427c	0.74	-0.1
2,725,150	-		Rv2427c	0.74	-1.7
2,725,150	-		Rv2427c	0.74	+0.5
2,725,150	-		Rv2427c	0.74	+0.0
2,725,334	+		Rv2427c	0.88	+0.9
2,725,562	-				-0.5
2,725,575	+				-1.0
2,725,628	-		Rv2427A	0.11	-0.5
2,725,655	+		Rv2427A	0.16	-2.0
2,725,656	-		Rv2427A	0.16	+0.0
2,725,845	+		Rv2427A	0.53	+0.6
2,726,098	-				-3.0
2,726,292	+		Rv2428	0.17	+0.4
2,726,303	+		Rv2428	0.19	+0.5