Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2350c

Experiment: 7H9 with Rifampicin 0.014 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.014 ug/mL
2,627,869	+		Rv2349c	0.46	-0.7
2,627,888	-		Rv2349c	0.47	-0.1
2,627,945	+		Rv2349c	0.51	+1.7
2,627,993	-		Rv2349c	0.54	-2.1
2,627,993	-		Rv2349c	0.54	-0.3
2,628,143	+		Rv2349c	0.64	-0.3
2,628,144	-		Rv2349c	0.64	-0.5
2,628,176	-		Rv2349c	0.66	-0.2
2,628,197	+		Rv2349c	0.67	-0.0
2,628,197	+		Rv2349c	0.67	+0.0
2,628,198	-		Rv2349c	0.67	-0.9
2,628,198	-		Rv2349c	0.67	-0.2
2,628,212	-		Rv2349c	0.68	-0.9
2,628,212	-		Rv2349c	0.68	+1.0
2,628,222	+		Rv2349c	0.69	+0.1
2,628,223	-		Rv2349c	0.69	-0.8
2,628,238	+		Rv2349c	0.70	-0.3
2,628,238	+		Rv2349c	0.70	-0.2
2,628,238	+		Rv2349c	0.70	-0.3
2,628,238	+		Rv2349c	0.70	-0.6
2,628,239	-		Rv2349c	0.70	+0.5
2,628,239	-		Rv2349c	0.70	+1.5
2,628,239	-		Rv2349c	0.70	+0.3
2,628,239	-		Rv2349c	0.70	-0.3
2,628,241	+		Rv2349c	0.70	+1.7
2,628,241	+		Rv2349c	0.70	+0.3
2,628,242	-		Rv2349c	0.70	+1.2
2,628,242	-		Rv2349c	0.70	-0.4
2,628,410	-		Rv2349c	0.81	-0.6
2,628,419	+		Rv2349c	0.82	-0.4
2,628,419	+		Rv2349c	0.82	+0.8
2,628,419	+		Rv2349c	0.82	-0.7
2,628,420	-		Rv2349c	0.82	+0.2
2,628,420	-		Rv2349c	0.82	-0.0
2,628,420	-		Rv2349c	0.82	-0.3
2,628,420	-		Rv2349c	0.82	-1.9
2,628,420	-		Rv2349c	0.82	-0.1
2,628,420	-		Rv2349c	0.82	+0.4
2,628,524	-		Rv2349c	0.89	-0.2
2,628,550	-				-0.5
2,628,607	+				+0.7
2,628,607	+				-0.8
2,628,608	-				+0.1
2,628,608	-				+0.6
2,628,608	-				+0.8
2,628,674	+				+1.4
2,628,675	-				+1.4
2,628,675	-				+0.4
2,628,743	+				-0.5
2,628,744	-				+0.5
2,628,890	-				-0.7
2,628,890	-				+0.1
2,629,122	+		Rv2350c	0.22	+1.3
2,629,292	+		Rv2350c	0.33	+0.2
2,629,292	+		Rv2350c	0.33	+1.2
2,629,293	-		Rv2350c	0.33	+0.7
2,629,481	+		Rv2350c	0.45	+1.7
2,629,559	+		Rv2350c	0.51	-0.4
2,629,605	-		Rv2350c	0.54	-0.1
2,629,605	-		Rv2350c	0.54	-0.2
2,629,605	-		Rv2350c	0.54	-0.5
2,629,661	+		Rv2350c	0.57	-0.4
2,629,662	-		Rv2350c	0.57	-0.1
2,629,662	-		Rv2350c	0.57	-0.1
2,629,678	+		Rv2350c	0.58	+0.4
2,629,681	-		Rv2350c	0.58	+0.7
2,629,745	+		Rv2350c	0.63	+0.4
2,630,145	-		Rv2350c	0.89	+0.3
2,630,388	+				-0.3
2,630,388	+				-1.1
2,630,388	+				-1.5
2,630,389	-				+1.7
2,630,389	-				+1.7
2,630,390	+				+0.3
2,630,391	-				-1.1
2,630,663	-				-0.2
2,630,890	-		Rv2351c	0.23	-0.5
2,630,890	-		Rv2351c	0.23	+0.2
2,631,057	+		Rv2351c	0.34	+0.4
2,631,057	+		Rv2351c	0.34	+1.1
2,631,057	+		Rv2351c	0.34	+0.2
2,631,057	+		Rv2351c	0.34	-0.4
2,631,057	+		Rv2351c	0.34	-0.1
2,631,057	+		Rv2351c	0.34	-1.1
2,631,058	-		Rv2351c	0.34	-0.5
2,631,058	-		Rv2351c	0.34	+1.1
2,631,058	-		Rv2351c	0.34	-0.6
2,631,068	-		Rv2351c	0.35	-0.3
2,631,188	+		Rv2351c	0.42	+0.7
2,631,247	-		Rv2351c	0.46	-0.2
2,631,247	-		Rv2351c	0.46	-0.3
2,631,264	+		Rv2351c	0.47	-0.4
2,631,264	+		Rv2351c	0.47	+0.5
2,631,265	-		Rv2351c	0.47	-0.3
2,631,265	-		Rv2351c	0.47	-0.0