Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2348c

Experiment: 7H9 with Rifampicin 0.014 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.014 ug/mL
2,625,686	+				+0.9
2,625,687	-				-0.1
2,625,801	+				+1.1
2,625,801	+				+0.8
2,625,802	-				+0.5
2,625,832	+				+0.7
2,625,832	+				+0.5
2,625,833	-				-0.7
2,626,160	-				+1.2
2,626,160	-				-0.1
2,626,856	+		Rv2348c	0.62	+0.8
2,627,058	+				-0.8
2,627,058	+				+0.8
2,627,058	+				-1.2
2,627,059	-				-1.7
2,627,059	-				-3.6
2,627,059	-				-1.3
2,627,077	+				+0.7
2,627,078	-				-0.6
2,627,152	+				-0.6
2,627,152	+				+1.2
2,627,152	+				+0.7
2,627,153	-				-0.4
2,627,153	-				-1.1
2,627,384	+		Rv2349c	0.14	+0.1
2,627,385	-		Rv2349c	0.14	-0.6
2,627,385	-		Rv2349c	0.14	-0.5
2,627,509	+		Rv2349c	0.22	+1.3
2,627,562	+		Rv2349c	0.26	+0.0
2,627,563	-		Rv2349c	0.26	-1.0
2,627,681	-		Rv2349c	0.33	-0.5
2,627,736	+		Rv2349c	0.37	+0.7
2,627,869	+		Rv2349c	0.46	-0.7
2,627,888	-		Rv2349c	0.47	-0.1
2,627,945	+		Rv2349c	0.51	+1.7