Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1260

Experiment: 7H9 with Rifampicin 0.014 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.014 ug/mL
1,407,260	+				-0.6
1,407,344	+				+0.4
1,407,344	+				-0.0
1,407,345	-				+0.3
1,407,825	-		Rv1259	0.54	-1.2
1,408,140	+		Rv1259	0.89	-0.8
1,408,161	-				-0.6
1,409,014	+		Rv1260	0.69	+0.8
1,409,015	-		Rv1260	0.69	-0.5
1,409,227	+		Rv1260	0.88	-0.4
1,409,433	-				-1.3
1,409,433	-				+0.5
1,409,546	-		Rv1261c	0.14	+1.8
1,409,590	+		Rv1261c	0.24	-1.2
1,409,686	+		Rv1261c	0.45	-1.1
1,409,734	+		Rv1261c	0.56	-0.3
1,409,755	+		Rv1261c	0.60	-0.8
1,410,071	-		Rv1262c	0.31	-1.3
1,410,318	-		Rv1262c	0.87	+0.2