Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1259

Experiment: 7H9 with Rifampicin 0.014 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.014 ug/mL
1,406,340	+		Rv1258c	0.21	-0.0
1,406,340	+		Rv1258c	0.21	+0.5
1,406,341	-		Rv1258c	0.21	-0.2
1,406,341	-		Rv1258c	0.21	-0.2
1,406,341	-		Rv1258c	0.21	-0.0
1,406,344	+		Rv1258c	0.21	-0.6
1,406,344	+		Rv1258c	0.21	-0.7
1,406,345	-		Rv1258c	0.21	+1.8
1,406,345	-		Rv1258c	0.21	-0.0
1,406,345	-		Rv1258c	0.21	+0.4
1,406,347	-		Rv1258c	0.21	+0.2
1,406,347	-		Rv1258c	0.21	+0.6
1,406,367	+		Rv1258c	0.23	+0.3
1,406,368	-		Rv1258c	0.23	-0.3
1,406,508	+		Rv1258c	0.34	+1.4
1,406,626	-		Rv1258c	0.43	+0.0
1,406,626	-		Rv1258c	0.43	-0.2
1,406,812	+		Rv1258c	0.58	-0.4
1,406,813	-		Rv1258c	0.58	+0.3
1,406,878	+		Rv1258c	0.63	-0.4
1,406,878	+		Rv1258c	0.63	+1.2
1,407,138	+		Rv1258c	0.84	+0.1
1,407,260	+				-0.6
1,407,344	+				+0.4
1,407,344	+				-0.0
1,407,345	-				+0.3
1,407,825	-		Rv1259	0.54	-1.2
1,408,140	+		Rv1259	0.89	-0.8
1,408,161	-				-0.6
1,409,014	+		Rv1260	0.69	+0.8
1,409,015	-		Rv1260	0.69	-0.5
1,409,227	+		Rv1260	0.88	-0.4