Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0916c

Experiment: 7H9 with Rifampicin 0.014 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.014 ug/mL
1,020,349	+		Rv0915c	0.23	-0.3
1,020,479	+		Rv0915c	0.33	+0.2
1,020,481	+		Rv0915c	0.33	+0.5
1,020,481	+		Rv0915c	0.33	-0.2
1,020,482	-		Rv0915c	0.33	-0.6
1,020,554	+		Rv0915c	0.39	-0.2
1,020,554	+		Rv0915c	0.39	-0.2
1,020,554	+		Rv0915c	0.39	+1.8
1,020,869	+		Rv0915c	0.64	-0.1
1,020,870	-		Rv0915c	0.64	-0.0
1,020,870	-		Rv0915c	0.64	+0.1
1,020,870	-		Rv0915c	0.64	-0.6
1,020,875	+		Rv0915c	0.64	-0.1
1,020,876	-		Rv0915c	0.64	-0.5
1,020,911	+		Rv0915c	0.67	-0.9
1,021,115	+		Rv0915c	0.83	-0.9
1,021,116	-		Rv0915c	0.83	+1.7
1,021,116	-		Rv0915c	0.83	-1.0
1,021,197	-		Rv0915c	0.90	+0.6
1,021,256	-				-0.8
1,021,283	+				+0.5
1,021,284	-				-0.8
1,021,524	+		Rv0916c	0.60	+1.1
1,021,525	-		Rv0916c	0.60	-0.2
1,021,693	-				+0.2
1,021,697	-				+0.3
1,021,733	+				+0.4
1,022,087	-				-0.5
1,022,207	+				-0.2
1,022,276	+		Rv0917	0.11	+1.8
1,022,276	+		Rv0917	0.11	+2.8
1,022,465	+		Rv0917	0.21	-1.8
1,022,503	+		Rv0917	0.23	+0.4
1,022,573	+		Rv0917	0.27	+0.1
1,022,574	-		Rv0917	0.27	-0.4
1,022,600	+		Rv0917	0.29	+0.1
1,022,600	+		Rv0917	0.29	+0.0