Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3711c

Experiment: 7H9 with Rifampicin 0.00045 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.00045 ug/mL
4,155,672	+				+0.4
4,155,672	+				-0.7
4,155,689	-				+1.3
4,155,689	-				-0.6
4,155,752	+				-0.2
4,155,752	+				+0.0
4,155,753	-				+0.1
4,155,753	-				-1.3
4,155,753	-				+0.4
4,155,876	+		Rv3711c	0.14	+1.9
4,155,877	-		Rv3711c	0.14	-0.5
4,155,877	-		Rv3711c	0.14	-0.2
4,156,001	+		Rv3711c	0.26	+0.9
4,156,002	-		Rv3711c	0.26	+1.5
4,156,056	+		Rv3711c	0.32	+0.7
4,156,057	-		Rv3711c	0.32	-0.5
4,156,221	-		Rv3711c	0.49	-0.7
4,156,566	-		Rv3711c	0.83	-0.2
4,156,589	+		Rv3711c	0.86	-0.1
4,156,590	-		Rv3711c	0.86	+0.1
4,156,969	+				-0.4
4,156,970	-				+0.3