Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3395c

Experiment: 7H9 with Rifampicin 0.00045 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.00045 ug/mL
3,810,818	+		Rv3394c	0.87	-0.4
3,810,818	+		Rv3394c	0.87	+0.3
3,810,989	+				-0.1
3,810,990	-				+0.3
3,811,113	+		Rv3395c	0.15	+0.2
3,811,730	+				-0.6
3,811,730	+				-0.4
3,811,730	+				+1.0
3,811,777	+				-0.1
3,812,082	+		Rv3395A	0.58	+0.3
3,812,083	-		Rv3395A	0.58	-0.3
3,812,083	-		Rv3395A	0.58	-0.3
3,812,083	-		Rv3395A	0.58	-0.7
3,812,230	+		Rv3395A	0.81	+0.6
3,812,343	+				+2.5
3,812,343	+				-0.5
3,812,344	-				-0.5
3,812,392	+				+0.1
3,812,392	+				+0.3
3,812,433	+				+0.7
3,812,434	-				-1.0
3,812,449	+				+0.5
3,812,449	+				-1.5
3,812,449	+				-0.4
3,812,449	+				+0.0
3,812,449	+				+0.2
3,812,450	-				-0.6
3,812,450	-				-0.8
3,812,486	+				+0.9
3,812,502	+				-1.2