Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2857c
Experiment: 7H9 with Rifampicin 0.00045 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Rifampicin 0.00045 ug/mL |
---|---|---|---|---|---|
remove | |||||
3,168,150 | - | -1.1 | |||
3,168,282 | + | +0.1 | |||
3,168,338 | + | -0.3 | |||
3,168,339 | - | +1.8 | |||
3,168,600 | - | +0.0 | |||
3,168,668 | - | Rv2857c | 0.11 | -0.1 | |
3,169,111 | + | Rv2857c | 0.68 | +0.6 | |
3,169,198 | + | Rv2857c | 0.79 | -0.1 | |
3,169,199 | - | Rv2857c | 0.79 | -0.4 | |
3,169,774 | + | Rv2858c | 0.31 | -0.3 | |
3,169,775 | - | Rv2858c | 0.31 | +0.9 |
Or see this region's nucleotide sequence