Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2774c

Experiment: 7H9 with Rifampicin 0.00045 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.00045 ug/mL
3,081,388	-		Rv2772c	0.57	+0.6
3,081,528	+		Rv2772c	0.86	-0.3
3,081,573	+				+0.7
3,081,573	+				-0.1
3,081,574	-				-1.2
3,082,454	-		Rv2774c	0.25	-0.5
3,082,454	-		Rv2774c	0.25	+0.8
3,082,800	+				+0.7
3,082,801	-				-0.7
3,082,804	+				-0.4
3,082,805	-				+1.1
3,082,805	-				-0.3
3,082,861	-				-1.0
3,082,961	+		Rv2775	0.11	-0.6
3,083,037	+		Rv2775	0.28	-0.7
3,083,038	-		Rv2775	0.28	+0.0
3,083,131	+		Rv2775	0.48	-0.8
3,083,131	+		Rv2775	0.48	+0.7
3,083,132	-		Rv2775	0.48	-0.3
3,083,132	-		Rv2775	0.48	+0.1
3,083,257	+		Rv2775	0.75	-0.2
3,083,347	+				-0.0
3,083,660	+		Rv2776c	0.31	+0.0
3,083,710	+		Rv2776c	0.36	-0.1
3,083,711	-		Rv2776c	0.36	+1.0
3,083,735	+		Rv2776c	0.39	-2.6
3,083,736	-		Rv2776c	0.39	-0.1