Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2410c

Experiment: 7H9 with Rifampicin 0.00045 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.00045 ug/mL
2,706,553	-				-0.5
2,706,582	+				+0.0
2,706,594	-				+0.5
2,706,609	+				+0.2
2,706,699	-				+1.2
2,706,738	+		Rv2409c	0.29	-1.3
2,706,750	+		Rv2409c	0.30	-0.5
2,706,876	+		Rv2409c	0.45	-0.2
2,706,877	-		Rv2409c	0.46	-0.6
2,707,177	-		Rv2409c	0.81	-0.3
2,707,177	-		Rv2409c	0.81	-0.6
2,707,269	+				-1.9
2,707,712	+		Rv2410c	0.39	+0.7
2,707,712	+		Rv2410c	0.39	+0.9
2,707,712	+		Rv2410c	0.39	+0.3
2,707,976	+		Rv2410c	0.66	-0.5
2,707,976	+		Rv2410c	0.66	+0.8
2,708,283	-				+0.0
2,708,371	+				+0.7
2,708,571	+		Rv2411c	0.16	+1.5
2,708,571	+		Rv2411c	0.16	+0.3
2,708,571	+		Rv2411c	0.16	-0.4
2,708,572	-		Rv2411c	0.16	-0.8
2,708,572	-		Rv2411c	0.16	-0.3
2,708,572	-		Rv2411c	0.16	+1.8
2,708,890	+		Rv2411c	0.35	-0.7
2,708,890	+		Rv2411c	0.35	-0.4
2,708,890	+		Rv2411c	0.35	+0.2
2,708,891	-		Rv2411c	0.35	+0.7
2,708,891	-		Rv2411c	0.35	-1.0
2,708,893	+		Rv2411c	0.35	-0.5
2,708,894	-		Rv2411c	0.35	-1.1
2,708,914	+		Rv2411c	0.36	-1.9
2,708,914	+		Rv2411c	0.36	-0.6
2,708,914	+		Rv2411c	0.36	+0.2
2,708,914	+		Rv2411c	0.36	-1.0
2,708,914	+		Rv2411c	0.36	+1.8
2,708,914	+		Rv2411c	0.36	-0.4
2,708,915	-		Rv2411c	0.37	-0.1
2,708,915	-		Rv2411c	0.37	-0.5
2,709,071	-		Rv2411c	0.46	+1.0
2,709,112	+		Rv2411c	0.48	+0.9
2,709,112	+		Rv2411c	0.48	+0.1
2,709,112	+		Rv2411c	0.48	-0.4
2,709,112	+		Rv2411c	0.48	-0.2
2,709,113	-		Rv2411c	0.48	-1.2
2,709,113	-		Rv2411c	0.48	-0.1
2,709,113	-		Rv2411c	0.48	-0.2
2,709,113	-		Rv2411c	0.48	-0.1
2,709,113	-		Rv2411c	0.48	+0.9
2,709,113	-		Rv2411c	0.48	+0.8
2,709,113	-		Rv2411c	0.48	-0.4
2,709,113	-		Rv2411c	0.48	+0.6
2,709,113	-		Rv2411c	0.48	-0.4
2,709,114	+		Rv2411c	0.49	+0.1
2,709,114	+		Rv2411c	0.49	-0.4
2,709,115	-		Rv2411c	0.49	-0.2
2,709,115	-		Rv2411c	0.49	-0.2
2,709,208	+		Rv2411c	0.54	-0.3
2,709,209	-		Rv2411c	0.54	-0.7
2,709,209	-		Rv2411c	0.54	-0.3
2,709,295	+		Rv2411c	0.59	+0.4
2,709,296	-		Rv2411c	0.60	-0.0
2,709,296	-		Rv2411c	0.60	+0.4