Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2334

Experiment: 7H9 with Rifampicin 0.00045 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.00045 ug/mL
2,607,825	+		Rv2333c	0.69	-0.3
2,607,825	+		Rv2333c	0.69	+0.0
2,607,825	+		Rv2333c	0.69	-1.1
2,607,826	-		Rv2333c	0.69	-0.5
2,607,826	-		Rv2333c	0.69	-0.2
2,607,826	-		Rv2333c	0.69	-0.4
2,607,826	-		Rv2333c	0.69	-0.5
2,607,889	+		Rv2333c	0.73	+1.8
2,608,063	+		Rv2333c	0.84	-0.3
2,608,091	+		Rv2333c	0.86	-0.2
2,608,091	+		Rv2333c	0.86	-0.2
2,608,092	-		Rv2333c	0.86	+0.3
2,608,171	-				+0.2
2,608,335	+				+0.1
2,608,335	+				-1.8
2,608,335	+				-0.7
2,608,335	+				-0.1
2,608,336	-				+1.4
2,608,370	+				-0.3
2,608,370	+				+0.7
2,608,370	+				-0.3
2,608,371	-				-0.0
2,608,485	-				+0.2
2,608,485	-				+1.8
2,608,514	+				+0.8
2,608,516	+				-0.4
2,608,539	+				+0.0
2,608,552	+				+0.6
2,609,503	-		Rv2334	0.76	-0.5
2,609,727	-				+0.8
2,609,928	+		Rv2335	0.28	-0.5
2,609,929	-		Rv2335	0.29	-0.3
2,609,929	-		Rv2335	0.29	-2.0
2,609,932	+		Rv2335	0.29	-0.9
2,610,427	+				-0.0
2,610,486	+				-1.6
2,610,574	+				-0.3
2,610,574	+				-0.3