Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2293c

Experiment: 7H9 with Rifampicin 0.00045 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.00045 ug/mL
2,563,297	+		Rv2291	0.14	+1.2
2,563,301	+		Rv2291	0.15	+1.8
2,563,302	-		Rv2291	0.15	-0.3
2,563,326	-		Rv2291	0.18	-0.0
2,563,326	-		Rv2291	0.18	+0.2
2,563,359	+		Rv2291	0.22	+1.8
2,563,359	+		Rv2291	0.22	+0.6
2,563,360	-		Rv2291	0.22	+0.5
2,563,360	-		Rv2291	0.22	-0.3
2,563,401	+		Rv2291	0.27	+0.4
2,564,100	-		Rv2292c	0.32	+0.1
2,564,260	+				+0.0
2,564,322	+				+0.1
2,564,328	+				-0.1
2,564,330	+				-0.3
2,564,330	+				+0.6
2,564,331	-				+0.0
2,564,355	+				+0.0
2,564,356	-				+0.8
2,564,429	+		Rv2293c	0.18	-0.3
2,564,753	+		Rv2293c	0.62	+1.0
2,564,754	-		Rv2293c	0.62	-0.2
2,564,818	+		Rv2293c	0.71	-0.6
2,564,818	+		Rv2293c	0.71	+3.4
2,564,819	-		Rv2293c	0.71	-0.5
2,564,821	+		Rv2293c	0.71	+0.1
2,565,040	+				-1.9
2,565,149	-				-0.1
2,565,262	+				-0.2
2,565,263	-				-0.6
2,565,280	+				-0.2
2,565,310	-				-0.4
2,565,316	-				-0.5
2,565,331	+				-0.7
2,565,332	-				+0.2
2,565,332	-				+0.8
2,565,335	+				-0.3
2,565,480	-		Rv2294	0.12	-0.2
2,565,485	+		Rv2294	0.13	-0.6
2,565,513	+		Rv2294	0.15	-0.0
2,565,513	+		Rv2294	0.15	-0.0
2,565,526	-		Rv2294	0.16	+0.5
2,565,526	-		Rv2294	0.16	-0.5
2,565,683	-		Rv2294	0.29	-0.2
2,565,683	-		Rv2294	0.29	-0.7
2,565,685	-		Rv2294	0.29	+0.6
2,565,697	-		Rv2294	0.30	-0.4
2,565,957	-		Rv2294	0.51	-0.4
2,565,977	+		Rv2294	0.53	+4.3
2,565,977	+		Rv2294	0.53	-0.4
2,566,022	-		Rv2294	0.57	+0.2