Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1578c

Experiment: 7H9 with Rifampicin 0.00045 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.00045 ug/mL
1,782,030	-				-0.4
1,782,291	+		Rv1577c	0.43	+1.0
1,782,529	+		Rv1577c	0.89	-0.5
1,782,600	-				-0.3
1,783,129	+		Rv1578c	0.79	+0.2
1,783,258	-				-0.3
1,783,351	-		Rv1579c	0.13	+0.0
1,783,480	-		Rv1579c	0.54	+0.5
1,783,480	-		Rv1579c	0.54	-0.1
1,783,783	+		Rv1580c	0.60	-1.9
1,783,783	+		Rv1580c	0.60	+1.0
1,783,783	+		Rv1580c	0.60	+0.1
1,783,783	+		Rv1580c	0.60	-0.3
1,783,784	-		Rv1580c	0.60	-1.1
1,783,920	+				-0.2
1,783,920	+				-0.5
1,784,198	+		Rv1581c	0.74	+2.2
1,784,199	-		Rv1581c	0.74	-0.1
1,784,199	-		Rv1581c	0.74	-0.3