Experiment: 7H9 with Rifampicin 0.00045 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0658c and Rv0659c are separated by 275 nucleotides Rv0659c and Rv0660c overlap by 14 nucleotides Rv0660c and Rv0661c are separated by 109 nucleotides Rv0661c and Rv0662c overlap by 4 nucleotides Rv0662c and Rv0663 are separated by 113 nucleotides
Rv0658c: Rv0658c - Probable conserved integral membrane protein, at 753,693 to 754,409
Rv0658c
Rv0659c: Rv0659c - Toxin MazF2, at 754,685 to 754,993
Rv0659c
Rv0660c: Rv0660c - Possible antitoxin MazE2, at 754,980 to 755,225
Rv0660c
Rv0661c: Rv0661c - Possible toxin VapC7, at 755,335 to 755,772
Rv0661c
Rv0662c: Rv0662c - Possible antitoxin VapB7, at 755,769 to 756,023
Rv0662c
Rv0663: Rv0663 - Possible arylsulfatase AtsD (aryl-sulfate sulphohydrolase) (arylsulphatase), at 756,137 to 758,500
Rv0663
Position (kb) 755
756 Strain fitness (log2 ratio) -2
-1
0
1 at 754.383 kb on + strand at 754.487 kb on + strand at 754.487 kb on + strand at 754.783 kb on + strand, within Rv0659c at 754.783 kb on + strand, within Rv0659c at 754.783 kb on + strand, within Rv0659c at 754.784 kb on - strand, within Rv0659c at 754.784 kb on - strand, within Rv0659c at 754.941 kb on - strand, within Rv0659c at 755.080 kb on + strand, within Rv0660c at 755.080 kb on + strand, within Rv0660c at 755.081 kb on - strand, within Rv0660c at 755.249 kb on + strand at 755.249 kb on + strand at 755.250 kb on - strand at 755.250 kb on - strand at 755.250 kb on - strand at 755.280 kb on - strand at 755.280 kb on - strand at 755.280 kb on - strand at 755.311 kb on + strand at 755.311 kb on + strand at 755.572 kb on - strand, within Rv0661c at 755.623 kb on + strand, within Rv0661c at 755.767 kb on + strand at 755.768 kb on - strand at 756.023 kb on + strand at 756.023 kb on + strand at 756.029 kb on + strand at 756.030 kb on - strand at 756.112 kb on + strand at 756.122 kb on + strand at 756.197 kb on + strand at 756.197 kb on + strand at 756.707 kb on + strand, within Rv0663
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Rifampicin 0.00045 ug/mL remove 754,383 + +0.1 754,487 + -0.7 754,487 + -0.5 754,783 + Rv0659c 0.32 -0.1 754,783 + Rv0659c 0.32 +1.1 754,783 + Rv0659c 0.32 +0.2 754,784 - Rv0659c 0.32 -0.9 754,784 - Rv0659c 0.32 -0.4 754,941 - Rv0659c 0.83 -0.8 755,080 + Rv0660c 0.41 -0.2 755,080 + Rv0660c 0.41 -0.8 755,081 - Rv0660c 0.41 -0.2 755,249 + +0.2 755,249 + -0.2 755,250 - +0.5 755,250 - -1.8 755,250 - -1.4 755,280 - +0.6 755,280 - -0.5 755,280 - -0.3 755,311 + +0.5 755,311 + +0.9 755,572 - Rv0661c 0.54 -0.1 755,623 + Rv0661c 0.66 +1.5 755,767 + -0.0 755,768 - +0.2 756,023 + -0.7 756,023 + +0.3 756,029 + +0.1 756,030 - +0.9 756,112 + +0.6 756,122 + +0.5 756,197 + -0.1 756,197 + +0.2 756,707 + Rv0663 0.24 +0.0
Or see this region's nucleotide sequence