Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3497c

Experiment: 7H9 with Rifampicin 0.00045 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.00045 ug/mL
3,914,964	+		Rv3496c	0.32	-0.7
3,914,964	+		Rv3496c	0.32	-0.3
3,914,964	+		Rv3496c	0.32	-2.2
3,914,964	+		Rv3496c	0.32	-1.4
3,914,965	-		Rv3496c	0.32	-0.7
3,914,965	-		Rv3496c	0.32	-0.7
3,914,966	+		Rv3496c	0.32	-0.7
3,914,973	+		Rv3496c	0.33	-0.9
3,914,973	+		Rv3496c	0.33	-1.1
3,914,973	+		Rv3496c	0.33	-0.3
3,915,255	-		Rv3496c	0.53	-0.6
3,915,527	+		Rv3496c	0.73	-1.0
3,915,543	+		Rv3496c	0.75	+0.5
3,915,544	-		Rv3496c	0.75	-0.7
3,915,544	-		Rv3496c	0.75	-1.2
3,915,544	-		Rv3496c	0.75	-0.7
3,915,644	-		Rv3496c	0.82	-0.2
3,915,644	-		Rv3496c	0.82	-1.1
3,915,729	+		Rv3496c	0.88	-0.6
3,915,773	-				-0.9
3,915,775	+				-0.8
3,915,795	+				-2.3
3,915,795	+				-0.2
3,915,796	-				-0.3
3,915,796	-				-0.4
3,916,076	+		Rv3497c	0.18	-1.1
3,916,107	+		Rv3497c	0.21	+0.0
3,916,107	+		Rv3497c	0.21	-0.3
3,916,108	-		Rv3497c	0.21	+2.0
3,916,109	+		Rv3497c	0.21	-0.3
3,916,109	+		Rv3497c	0.21	-1.8
3,916,110	-		Rv3497c	0.21	-0.8
3,916,177	-		Rv3497c	0.27	-0.5
3,916,497	+		Rv3497c	0.57	-0.6
3,916,550	+		Rv3497c	0.62	-1.1
3,916,551	-		Rv3497c	0.62	-0.0
3,916,767	-		Rv3497c	0.82	-0.3
3,916,767	-		Rv3497c	0.82	-2.8
3,916,808	+		Rv3497c	0.86	-1.2
3,916,818	-		Rv3497c	0.87	-1.0
3,916,935	+				-0.3
3,916,948	-				-1.6
3,917,055	+		Rv3498c	0.10	-0.4
3,917,103	+		Rv3498c	0.15	-0.2
3,917,103	+		Rv3498c	0.15	-1.0
3,917,103	+		Rv3498c	0.15	-1.7
3,917,391	-		Rv3498c	0.42	-0.2
3,917,715	+		Rv3498c	0.73	-0.6
3,917,716	-		Rv3498c	0.73	-1.5
3,917,724	+		Rv3498c	0.74	-0.6
3,917,725	-		Rv3498c	0.74	-0.9
3,917,865	+		Rv3498c	0.87	-2.4
3,917,866	-		Rv3498c	0.87	-0.9