Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2947c

Experiment: 7H9 with Rifampicin 0.00045 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.00045 ug/mL
3,295,963	+				-0.8
3,295,963	+				+0.6
3,295,963	+				+0.2
3,296,050	-				-1.2
3,296,302	+				+0.3
3,296,303	-				-0.6
3,296,303	-				-0.4
3,296,425	+				+0.5
3,296,633	+		Rv2947c	0.19	-0.2
3,296,733	-		Rv2947c	0.26	-0.4
3,296,806	+		Rv2947c	0.31	-0.1
3,296,806	+		Rv2947c	0.31	-0.7
3,296,806	+		Rv2947c	0.31	-1.0
3,296,807	-		Rv2947c	0.31	-0.9
3,296,807	-		Rv2947c	0.31	-0.4
3,296,807	-		Rv2947c	0.31	-0.4
3,297,039	+		Rv2947c	0.46	-1.2
3,297,039	+		Rv2947c	0.46	+0.1
3,297,040	-		Rv2947c	0.46	-0.2
3,297,040	-		Rv2947c	0.46	-1.6
3,297,202	-		Rv2947c	0.57	-0.5
3,297,235	+		Rv2947c	0.59	+1.0
3,297,240	-		Rv2947c	0.60	-1.3
3,297,240	-		Rv2947c	0.60	-0.4
3,297,240	-		Rv2947c	0.60	-0.2
3,297,240	-		Rv2947c	0.60	+0.4
3,297,240	-		Rv2947c	0.60	-0.5
3,297,288	-		Rv2947c	0.63	-0.4
3,297,312	+		Rv2947c	0.65	+0.1
3,297,313	-		Rv2947c	0.65	-0.3
3,297,313	-		Rv2947c	0.65	-0.2
3,297,344	+		Rv2947c	0.67	-0.4
3,297,459	+		Rv2947c	0.74	+0.4
3,297,460	-		Rv2947c	0.74	-0.0
3,297,527	+		Rv2947c	0.79	-0.9
3,297,560	+		Rv2947c	0.81	-0.2
3,297,560	+		Rv2947c	0.81	-0.1
3,297,561	-		Rv2947c	0.81	+1.0
3,297,561	-		Rv2947c	0.81	-0.4
3,297,561	-		Rv2947c	0.81	-0.4
3,297,562	+		Rv2947c	0.81	-0.2
3,297,562	+		Rv2947c	0.81	+0.7
3,297,563	-		Rv2947c	0.81	+2.0
3,297,720	-				-0.4
3,297,769	+				+1.6
3,297,769	+				-0.3
3,297,769	+				-1.0
3,297,769	+				-0.3
3,297,770	-				-0.2
3,297,770	-				-0.1
3,297,773	+				-0.1
3,297,774	-				+1.0
3,297,835	+				-0.3
3,297,835	+				-0.2
3,297,836	-				+0.3
3,298,115	-		Rv2948c	0.13	-0.4
3,298,142	-		Rv2948c	0.14	+0.2
3,298,281	+		Rv2948c	0.21	-0.1
3,298,281	+		Rv2948c	0.21	+0.0
3,298,281	+		Rv2948c	0.21	-1.5
3,298,281	+		Rv2948c	0.21	-0.2
3,298,281	+		Rv2948c	0.21	-1.3
3,298,281	+		Rv2948c	0.21	+1.1
3,298,282	-		Rv2948c	0.21	+1.0
3,298,282	-		Rv2948c	0.21	+0.4
3,298,282	-		Rv2948c	0.21	-0.3
3,298,305	+		Rv2948c	0.22	-0.3
3,298,808	-		Rv2948c	0.46	-0.2
3,298,808	-		Rv2948c	0.46	+0.5
3,298,811	+		Rv2948c	0.46	-1.6
3,298,811	+		Rv2948c	0.46	-0.1
3,298,812	-		Rv2948c	0.46	-1.1
3,298,812	-		Rv2948c	0.46	-0.2
3,298,832	+		Rv2948c	0.47	-1.2