Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0354c

Experiment: 7H9 with Rifampicin 0.00045 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Rifampicin 0.00045 ug/mL
423,631	-				-0.1
423,728	+		Rv0353	0.23	+0.1
423,728	+		Rv0353	0.23	-0.2
423,728	+		Rv0353	0.23	-0.6
423,732	+		Rv0353	0.24	+0.7
423,732	+		Rv0353	0.24	-1.4
423,733	-		Rv0353	0.25	+0.2
423,733	-		Rv0353	0.25	+0.9
424,031	+				+0.0
424,263	+				-0.2
424,263	+				-1.9
424,264	-				-0.2
424,264	-				-0.1
424,270	+				+2.0
424,271	-				+1.0
424,604	-		Rv0354c	0.79	-0.3
424,632	+		Rv0354c	0.85	+0.1
424,632	+		Rv0354c	0.85	-0.5
424,632	+		Rv0354c	0.85	-0.3
424,633	-		Rv0354c	0.85	+2.0
424,653	+				-1.1
424,653	+				-0.7
424,653	+				+0.2
424,653	+				-0.5
424,653	+				+2.0
424,653	+				-0.1
424,653	+				-0.4
424,654	-				+0.5
424,654	-				-2.9
424,654	-				-1.2
424,654	-				+1.7
424,654	-				-2.0
424,654	-				-1.5
424,675	+				+0.2
424,675	+				+0.6
424,675	+				+0.1
424,675	+				-0.5
424,676	-				-1.0
424,676	-				+1.6
424,676	-				-0.1
424,676	-				-0.9
424,676	-				+0.6
424,676	-				-0.1
424,676	-				-0.1
424,728	-				-0.2
424,773	+				+0.0
424,797	-				-0.6
424,797	-				+0.9
424,844	-				-1.3
424,844	-				-0.1
424,973	+				-0.7
424,974	-				-0.2
424,974	-				+0.0
424,974	-				-0.2
424,974	-				+0.3
425,004	-				+0.8
425,050	+				-0.1
425,050	+				-0.3
425,051	-				-0.7
425,063	+				-0.8
425,064	-				+0.7
425,154	-				-0.2
425,154	-				+1.0
425,230	+				-2.0
425,231	-				-0.1
425,538	-				-0.1
425,538	-				+0.3
425,538	-				-0.7
425,567	+				-0.6
425,628	-				+0.7