Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv2906c and Rv2907c are separated by 3 nucleotides Rv2907c and Rv2908c are separated by 13 nucleotides Rv2908c and Rv2909c are separated by 7 nucleotides Rv2909c and Rv2910c are separated by 183 nucleotides
Rv2906c: Rv2906c - Probable tRNA (guanine-N1)-methyltransferase TrmD (M1G-methyltransferase) (tRNA [GM37] methyltransferase), at 3,215,665 to 3,216,357
Rv2906c
Rv2907c: Rv2907c - Probable 16S rRNA processing protein RimM, at 3,216,361 to 3,216,891
Rv2907c
Rv2908c: Rv2908c - Conserved hypothetical protein, at 3,216,905 to 3,217,147
Rv2908c
Rv2909c: Rv2909c - 30S ribosomal protein S16 RpsP, at 3,217,155 to 3,217,643
Rv2909c
Rv2910c: Rv2910c - Conserved hypothetical protein, at 3,217,827 to 3,218,270
Rv2910c
Position (kb)
3216
3217
3218 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3217.658 kb on - strand at 3217.910 kb on - strand, within Rv2910c at 3218.036 kb on - strand, within Rv2910c at 3218.036 kb on - strand, within Rv2910c at 3218.037 kb on + strand, within Rv2910c at 3218.037 kb on + strand, within Rv2910c at 3218.038 kb on - strand, within Rv2910c at 3218.086 kb on + strand, within Rv2910c at 3218.116 kb on + strand, within Rv2910c at 3218.125 kb on + strand, within Rv2910c at 3218.126 kb on - strand, within Rv2910c at 3218.126 kb on - strand, within Rv2910c
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 3,217,658 - -0.2 3,217,910 - Rv2910c 0.19 -0.2 3,218,036 - Rv2910c 0.47 -0.9 3,218,036 - Rv2910c 0.47 +0.5 3,218,037 + Rv2910c 0.47 -0.8 3,218,037 + Rv2910c 0.47 -0.3 3,218,038 - Rv2910c 0.48 -0.4 3,218,086 + Rv2910c 0.58 +2.9 3,218,116 + Rv2910c 0.65 -2.7 3,218,125 + Rv2910c 0.67 +0.9 3,218,126 - Rv2910c 0.67 +1.2 3,218,126 - Rv2910c 0.67 -0.6
Or see this region's nucleotide sequence