Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv2744c and Rv2745c are separated by 129 nucleotides Rv2745c and Rv2746c are separated by 70 nucleotides Rv2746c and Rv2747 are separated by 30 nucleotides Rv2747 and Rv2748c are separated by 68 nucleotides
Rv2744c: Rv2744c - Conserved 35 kDa alanine rich protein, at 3,057,251 to 3,058,063
Rv2744c
Rv2745c: Rv2745c - Transcriptional regulatory protein ClgR, at 3,058,193 to 3,058,531
Rv2745c
Rv2746c: Rv2746c - Probable PGP synthase PgsA3 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase) (phosphatidylglycerophosphate synthase), at 3,058,602 to 3,059,231
Rv2746c
Rv2747: Rv2747 - Probable L-glutamate alpha-N-acetyltranferase ArgA (alpha-N-acetylglutamate synthase), at 3,059,262 to 3,059,786
Rv2747
Rv2748c: Rv2748c - Possible cell division transmembrane protein FtsK, at 3,059,855 to 3,062,506
Rv2748c
Position (kb)
3058
3059
3060 Strain fitness (log2 ratio)
-1
0
1 at 3057.771 kb on + strand, within Rv2744c at 3057.771 kb on + strand, within Rv2744c at 3057.772 kb on - strand, within Rv2744c at 3058.032 kb on + strand at 3058.032 kb on + strand at 3058.033 kb on - strand at 3058.033 kb on - strand at 3058.046 kb on - strand at 3058.194 kb on + strand at 3058.195 kb on - strand at 3058.361 kb on - strand, within Rv2745c at 3058.422 kb on + strand, within Rv2745c at 3058.422 kb on + strand, within Rv2745c at 3059.173 kb on - strand at 3059.173 kb on - strand at 3059.785 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 3,057,771 + Rv2744c 0.64 +0.2 3,057,771 + Rv2744c 0.64 -0.7 3,057,772 - Rv2744c 0.64 -0.6 3,058,032 + -0.9 3,058,032 + +0.1 3,058,033 - +1.4 3,058,033 - -1.0 3,058,046 - -1.7 3,058,194 + -0.6 3,058,195 - +0.4 3,058,361 - Rv2745c 0.50 -0.7 3,058,422 + Rv2745c 0.68 +0.4 3,058,422 + Rv2745c 0.68 -0.6 3,059,173 - -1.1 3,059,173 - -0.4 3,059,785 - -0.2
Or see this region's nucleotide sequence