Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2439c

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRv2438c and Rv2438A overlap by 123 nucleotidesRv2438A and Rv2439c are separated by 129 nucleotidesRv2439c and Rv2440c overlap by 1 nucleotides Rv2438c: Rv2438c - Glutamine-dependent NAD(+) synthetase NadE (NAD(+) synthase [glutamine-hydrolysing]), at 2,734,792 to 2,736,831 Rv2438c Rv2438A: Rv2438A - Conserved hypothetical protein, at 2,736,709 to 2,736,987 Rv2438A Rv2439c: Rv2439c - Probable glutamate 5-kinase protein ProB (gamma-glutamyl kinase) (GK), at 2,737,117 to 2,738,247 Rv2439c Rv2440c: Rv2440c - Probable GTP1/Obg-family GTP-binding protein Obg, at 2,738,247 to 2,739,686 Rv2440c Position (kb) 2737 2738 2739Strain fitness (log2 ratio) -1 0 1at 2737.118 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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2,737,118 + -0.2

Or see this region's nucleotide sequence