Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2363

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRv2361c and Rv2362c overlap by 8 nucleotidesRv2362c and Rv2363 are separated by 61 nucleotidesRv2363 and Rv2364c overlap by 4 nucleotidesRv2364c and Rv2365c are separated by 73 nucleotides Rv2361c: Rv2361c - Long (C50) chain Z-isoprenyl diphosphate synthase (Z-decaprenyl diphosphate synthase), at 2,642,578 to 2,643,468 Rv2361c Rv2362c: Rv2362c - Possible DNA repair protein RecO, at 2,643,461 to 2,644,258 Rv2362c Rv2363: Rv2363 - Probable amidase AmiA2 (aminohydrolase), at 2,644,320 to 2,645,774 Rv2363 Rv2364c: Rv2364c - Probable GTP-binding protein Era, at 2,645,771 to 2,646,673 Rv2364c Rv2365c: Rv2365c - Conserved hypothetical protein, at 2,646,747 to 2,647,088 Rv2365c Position (kb) 2644 2645 2646Strain fitness (log2 ratio) -1 0 1at 2644.265 kb on - strandat 2644.265 kb on - strandat 2644.728 kb on - strand, within Rv2363

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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2,644,265 - -0.3
2,644,265 - -0.6
2,644,728 - Rv2363 0.28 +0.4

Or see this region's nucleotide sequence