Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1610

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRv1609 and Rv1610 overlap by 11 nucleotidesRv1610 and Rv1611 are separated by 89 nucleotidesRv1611 and Rv1612 are separated by 68 nucleotides Rv1609: Rv1609 - Anthranilate synthase component I TrpE (glutamine amidotransferase), at 1,807,903 to 1,809,453 Rv1609 Rv1610: Rv1610 - Possible conserved membrane protein, at 1,809,443 to 1,810,150 Rv1610 Rv1611: Rv1611 - Probable indole-3-glycerol phosphate synthase TrpC, at 1,810,240 to 1,811,058 Rv1611 Rv1612: Rv1612 - Tryptophan synthase, beta subunit TrpB, at 1,811,127 to 1,812,359 Rv1612 Position (kb) 1809 1810 1811Strain fitness (log2 ratio) -1 0 1at 1811.104 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,811,104 + +0.0

Or see this region's nucleotide sequence