Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1298

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRv1297 and Rv1298 are separated by 150 nucleotidesRv1298 and Rv1299 are separated by 89 nucleotides Rv1297: Rv1297 - Probable transcription termination factor Rho homolog, at 1,453,204 to 1,455,012 Rv1297 Rv1298: Rv1298 - 50S ribosomal protein L31 RpmE, at 1,455,163 to 1,455,405 Rv1298 Rv1299: Rv1299 - Probable peptide chain release factor 1 PrfA (RF-1), at 1,455,495 to 1,456,568 Rv1299 Position (kb) 1455 1456Strain fitness (log2 ratio) -1 0 1at 1455.403 kb on + strandat 1455.412 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,455,403 + -0.6
1,455,412 + +0.0

Or see this region's nucleotide sequence