Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0813c and Rv0814c are separated by 162 nucleotides Rv0814c and Rv0815c are separated by 1 nucleotides Rv0815c and Rv0816c are separated by 292 nucleotides Rv0816c and Rv0817c overlap by 4 nucleotides
Rv0813c: Rv0813c - Conserved protein, at 907,338 to 908,018
Rv0813c
Rv0814c: Rv0814c - Conserved protein SseC2, at 908,181 to 908,483
Rv0814c
Rv0815c: Rv0815c - Probable thiosulfate sulfurtransferase CysA2 (rhodanese-like protein) (thiosulfate cyanide transsulfurase) (thiosulfate thiotransferase), at 908,485 to 909,318
Rv0815c
Rv0816c: Rv0816c - Probable thioredoxin ThiX, at 909,611 to 910,033
Rv0816c
Rv0817c: Rv0817c - Probable conserved exported protein, at 910,030 to 910,842
Rv0817c
Position (kb) 908
909
910 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 907.575 kb on + strand, within Rv0813c at 907.575 kb on + strand, within Rv0813c at 907.576 kb on - strand, within Rv0813c at 907.576 kb on - strand, within Rv0813c at 907.647 kb on + strand, within Rv0813c at 907.648 kb on - strand, within Rv0813c at 907.648 kb on - strand, within Rv0813c at 907.663 kb on + strand, within Rv0813c at 907.664 kb on - strand, within Rv0813c at 907.664 kb on - strand, within Rv0813c at 907.711 kb on + strand, within Rv0813c at 907.712 kb on - strand, within Rv0813c at 907.756 kb on + strand, within Rv0813c at 908.068 kb on + strand at 908.125 kb on + strand at 908.125 kb on + strand at 908.125 kb on + strand at 908.125 kb on + strand at 908.200 kb on - strand at 908.200 kb on - strand at 909.337 kb on + strand at 909.337 kb on + strand at 909.385 kb on + strand at 909.385 kb on + strand at 909.386 kb on - strand at 909.386 kb on - strand at 909.440 kb on + strand at 909.454 kb on + strand at 909.455 kb on - strand at 909.464 kb on + strand at 909.464 kb on + strand at 909.500 kb on + strand at 909.501 kb on - strand at 909.605 kb on + strand at 909.605 kb on + strand at 909.825 kb on - strand, within Rv0816c at 910.003 kb on + strand at 910.003 kb on + strand at 910.004 kb on - strand at 910.004 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 907,575 + Rv0813c 0.35 +0.8 907,575 + Rv0813c 0.35 -1.0 907,576 - Rv0813c 0.35 -0.8 907,576 - Rv0813c 0.35 -2.8 907,647 + Rv0813c 0.45 +1.8 907,648 - Rv0813c 0.46 -0.1 907,648 - Rv0813c 0.46 +0.4 907,663 + Rv0813c 0.48 +0.2 907,664 - Rv0813c 0.48 -0.7 907,664 - Rv0813c 0.48 -0.3 907,711 + Rv0813c 0.55 +0.6 907,712 - Rv0813c 0.55 -0.3 907,756 + Rv0813c 0.61 -0.5 908,068 + -0.4 908,125 + -0.3 908,125 + -0.5 908,125 + -0.5 908,125 + -0.7 908,200 - +0.1 908,200 - -0.3 909,337 + +0.5 909,337 + -0.5 909,385 + -0.3 909,385 + -0.1 909,386 - +0.3 909,386 - +0.6 909,440 + -0.4 909,454 + -0.2 909,455 - -0.3 909,464 + -0.9 909,464 + +0.1 909,500 + -2.0 909,501 - -2.2 909,605 + +0.3 909,605 + -0.2 909,825 - Rv0816c 0.51 -0.1 910,003 + -0.5 910,003 + -0.4 910,004 - +0.0 910,004 - +1.8
Or see this region's nucleotide sequence