Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0776c and Rv0777 are separated by 244 nucleotides Rv0777 and Rv0778 are separated by 4 nucleotides
Rv0775: Rv0775 - Conserved hypothetical protein, at 868,407 to 869,030
Rv0775
Rv0776c: Rv0776c - Conserved hypothetical protein, at 868,984 to 869,763
Rv0776c
Rv0777: Rv0777 - Probable adenylosuccinate lyase PurB (adenylosuccinase) (ASL) (ASASE), at 870,008 to 871,426
Rv0777
Rv0778: Rv0778 - Possible cytochrome P450 126 Cyp126, at 871,431 to 872,675
Rv0778
Position (kb) 870
871
872 Strain fitness (log2 ratio) -1
0
1
2 at 869.060 kb on + strand at 869.061 kb on - strand at 869.081 kb on + strand, within Rv0776c at 869.114 kb on + strand, within Rv0776c at 869.115 kb on - strand, within Rv0776c at 869.134 kb on + strand, within Rv0776c at 869.290 kb on + strand, within Rv0776c at 869.291 kb on - strand, within Rv0776c at 869.291 kb on - strand, within Rv0776c at 869.291 kb on - strand, within Rv0776c at 869.388 kb on - strand, within Rv0776c at 869.388 kb on - strand, within Rv0776c at 869.431 kb on - strand, within Rv0776c at 869.859 kb on + strand at 869.860 kb on - strand at 869.966 kb on + strand at 871.436 kb on + strand at 871.540 kb on - strand at 871.638 kb on + strand, within Rv0778 at 871.639 kb on - strand, within Rv0778 at 871.840 kb on + strand, within Rv0778 at 871.840 kb on + strand, within Rv0778 at 872.037 kb on + strand, within Rv0778 at 872.038 kb on - strand, within Rv0778 at 872.043 kb on + strand, within Rv0778 at 872.043 kb on + strand, within Rv0778 at 872.044 kb on - strand, within Rv0778 at 872.067 kb on - strand, within Rv0778 at 872.160 kb on + strand, within Rv0778 at 872.160 kb on + strand, within Rv0778 at 872.161 kb on - strand, within Rv0778
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 869,060 + -0.5 869,061 - -0.9 869,081 + Rv0776c 0.12 +1.2 869,114 + Rv0776c 0.17 -0.2 869,115 - Rv0776c 0.17 +0.0 869,134 + Rv0776c 0.19 -0.2 869,290 + Rv0776c 0.39 +0.1 869,291 - Rv0776c 0.39 -0.2 869,291 - Rv0776c 0.39 -0.2 869,291 - Rv0776c 0.39 +1.8 869,388 - Rv0776c 0.52 +0.2 869,388 - Rv0776c 0.52 +0.3 869,431 - Rv0776c 0.57 +1.8 869,859 + -0.1 869,860 - +0.6 869,966 + +1.8 871,436 + +0.5 871,540 - +0.3 871,638 + Rv0778 0.17 -0.1 871,639 - Rv0778 0.17 -1.2 871,840 + Rv0778 0.33 +1.1 871,840 + Rv0778 0.33 +0.4 872,037 + Rv0778 0.49 -0.3 872,038 - Rv0778 0.49 -0.2 872,043 + Rv0778 0.49 -1.2 872,043 + Rv0778 0.49 -0.1 872,044 - Rv0778 0.49 -0.6 872,067 - Rv0778 0.51 -0.4 872,160 + Rv0778 0.59 -1.3 872,160 + Rv0778 0.59 -0.3 872,161 - Rv0778 0.59 -0.7
Or see this region's nucleotide sequence