Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0726c and Rv0727c are separated by 202 nucleotides Rv0727c and Rv0728c overlap by 4 nucleotides Rv0728c and Rv0729 are separated by 30 nucleotides
Rv0726c: Rv0726c - Possible S-adenosylmethionine-dependent methyltransferase, at 818,537 to 819,640
Rv0726c
Rv0727c: Rv0727c - Possible L-fuculose phosphate aldolase FucA (L-fuculose-1-phosphate aldolase), at 819,843 to 820,499
Rv0727c
Rv0728c: Rv0728c - Possible D-3-phosphoglycerate dehydrogenase SerA2 (phosphoglycerate dehydrogenase) (PGDH), at 820,496 to 821,476
Rv0728c
Rv0729: Rv0729 - Possible D-xylulose kinase XylB (xylulokinase) (xylulose kinase), at 821,507 to 822,853
Rv0729
Position (kb) 820
821
822 Strain fitness (log2 ratio) -1
0
1
2 at 819.633 kb on + strand at 819.633 kb on + strand at 819.633 kb on + strand at 819.633 kb on + strand at 819.633 kb on + strand at 819.633 kb on + strand at 819.633 kb on + strand at 819.633 kb on + strand at 819.634 kb on - strand at 819.634 kb on - strand at 819.634 kb on - strand at 819.634 kb on - strand at 819.634 kb on - strand at 819.634 kb on - strand at 819.634 kb on - strand at 819.634 kb on - strand at 819.680 kb on - strand at 819.680 kb on - strand at 819.752 kb on + strand at 819.792 kb on - strand at 819.792 kb on - strand at 819.844 kb on + strand at 819.872 kb on - strand at 820.102 kb on + strand, within Rv0727c at 820.132 kb on + strand, within Rv0727c at 820.257 kb on + strand, within Rv0727c at 820.257 kb on + strand, within Rv0727c at 820.257 kb on + strand, within Rv0727c at 820.257 kb on + strand, within Rv0727c at 820.258 kb on - strand, within Rv0727c at 820.263 kb on + strand, within Rv0727c at 820.264 kb on - strand, within Rv0727c at 820.323 kb on + strand, within Rv0727c at 820.323 kb on + strand, within Rv0727c at 820.323 kb on + strand, within Rv0727c at 820.323 kb on + strand, within Rv0727c at 820.355 kb on - strand, within Rv0727c at 820.508 kb on + strand at 820.508 kb on + strand at 820.509 kb on - strand at 821.356 kb on - strand, within Rv0728c at 821.391 kb on + strand at 821.393 kb on + strand at 821.393 kb on + strand at 821.394 kb on - strand at 821.949 kb on - strand, within Rv0729 at 821.979 kb on - strand, within Rv0729 at 821.979 kb on - strand, within Rv0729 at 822.205 kb on - strand, within Rv0729 at 822.356 kb on - strand, within Rv0729 at 822.415 kb on + strand, within Rv0729 at 822.415 kb on + strand, within Rv0729 at 822.416 kb on - strand, within Rv0729 at 822.416 kb on - strand, within Rv0729 at 822.417 kb on + strand, within Rv0729 at 822.417 kb on + strand, within Rv0729 at 822.417 kb on + strand, within Rv0729 at 822.417 kb on + strand, within Rv0729 at 822.417 kb on + strand, within Rv0729 at 822.418 kb on - strand, within Rv0729 at 822.418 kb on - strand, within Rv0729
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 819,633 + -1.5 819,633 + +0.1 819,633 + +0.4 819,633 + +0.2 819,633 + +0.0 819,633 + -0.2 819,633 + +0.0 819,633 + -0.3 819,634 - -0.7 819,634 - -0.2 819,634 - -0.0 819,634 - -1.0 819,634 - +0.8 819,634 - +0.6 819,634 - -0.4 819,634 - +0.8 819,680 - -0.2 819,680 - +0.6 819,752 + -0.2 819,792 - -0.1 819,792 - -1.1 819,844 + -0.6 819,872 - +1.8 820,102 + Rv0727c 0.39 -0.3 820,132 + Rv0727c 0.44 -0.1 820,257 + Rv0727c 0.63 +0.6 820,257 + Rv0727c 0.63 -0.8 820,257 + Rv0727c 0.63 -1.3 820,257 + Rv0727c 0.63 +1.8 820,258 - Rv0727c 0.63 -0.7 820,263 + Rv0727c 0.64 +0.1 820,264 - Rv0727c 0.64 -0.2 820,323 + Rv0727c 0.73 -0.6 820,323 + Rv0727c 0.73 +0.2 820,323 + Rv0727c 0.73 -0.2 820,323 + Rv0727c 0.73 -0.3 820,355 - Rv0727c 0.78 -0.2 820,508 + -0.4 820,508 + +0.3 820,509 - -0.1 821,356 - Rv0728c 0.88 -0.6 821,391 + -0.1 821,393 + -1.0 821,393 + +0.1 821,394 - -0.2 821,949 - Rv0729 0.33 +1.0 821,979 - Rv0729 0.35 -0.2 821,979 - Rv0729 0.35 -0.9 822,205 - Rv0729 0.52 +0.6 822,356 - Rv0729 0.63 -1.2 822,415 + Rv0729 0.67 +0.4 822,415 + Rv0729 0.67 +0.2 822,416 - Rv0729 0.67 +0.1 822,416 - Rv0729 0.67 +0.5 822,417 + Rv0729 0.68 +0.3 822,417 + Rv0729 0.68 +0.1 822,417 + Rv0729 0.68 +0.1 822,417 + Rv0729 0.68 -0.6 822,417 + Rv0729 0.68 -0.0 822,418 - Rv0729 0.68 +0.0 822,418 - Rv0729 0.68 +0.6
Or see this region's nucleotide sequence